RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 KBTBD4Q9NVX7 518 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 PPEF2O14830 753 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 NARSO43776 548 aaKnown RBP15.69■□□□□ 0.1
HMGN3-201ENST00000275036 TBC1D4O60343 1298 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 LRPAP1P30533 357 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 HOXD11P31277 338 aaPredicted RBP15.69■□□□□ 0.1
HMGN3-201ENST00000275036 ACOT2P49753 483 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 KYAT1Q16773 422 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 VARS2Q5ST30 1063 aaKnown RBP15.69■□□□□ 0.1
HMGN3-201ENST00000275036 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
HMGN3-201ENST00000275036 ADALQ6DHV7 355 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 PDXDC1Q6P996 788 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
HMGN3-201ENST00000275036 GET4Q7L5D6 327 aaPredicted RBP15.69■□□□□ 0.1
HMGN3-201ENST00000275036 GLIS3Q8NEA6 775 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 ZSWIM2Q8NEG5 633 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 SLC7A14Q8TBB6 771 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 KCNG4Q8TDN1 519 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 SUSD3Q96L08 255 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 TNMDQ9H2S6 317 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 PANK4Q9NVE7 773 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 BACE2Q9Y5Z0 518 aa15.69■□□□□ 0.1
HMGN3-201ENST00000275036 CCL16O15467 120 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 GCNT3O95395 438 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 NFICP08651 508 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 CYP3A5P20815 502 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 GBP2P32456 591 aaPredicted RBP15.68■□□□□ 0.1
HMGN3-201ENST00000275036 ME1P48163 572 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 ROR1Q01973 937 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 NHLH1Q02575 133 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 TCF15Q12870 199 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 MRPL58Q14197 206 aaKnown RBP15.68■□□□□ 0.1
HMGN3-201ENST00000275036 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 ATL3Q6DD88 541 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 JADE1Q6IE81 842 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 SLC8B1Q6J4K2 584 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 ELMSAN1Q6PJG2 1045 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 ANKS3Q6ZW76 656 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 GRASPQ7Z6J2 395 aaPredicted RBP15.68■□□□□ 0.1
HMGN3-201ENST00000275036 SUGP1Q8IWZ8 645 aaKnown RBP15.68■□□□□ 0.1
HMGN3-201ENST00000275036 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 TRIM9Q9C026 710 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 HCFC1R1Q9NWW0 138 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 RCOR1Q9UKL0 485 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 AGO2Q9UKV8 859 aaKnown RBP15.68■□□□□ 0.1
HMGN3-201ENST00000275036 UBQLN1Q9UMX0 589 aaKnown RBP15.68■□□□□ 0.1
HMGN3-201ENST00000275036 NUB1Q9Y5A7 615 aa15.68■□□□□ 0.1
HMGN3-201ENST00000275036 WDR27A2RRH5 827 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 SYN3O14994 580 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 POLR2DO15514 142 aaKnown RBP15.67■□□□□ 0.1
HMGN3-201ENST00000275036 PRPF6O94906 941 aaKnown RBP15.67■□□□□ 0.1
HMGN3-201ENST00000275036 HNRNPA1P09651 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMGN3-201ENST00000275036 CASP1P29466 404 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 AVPR2P30518 371 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 MCM4P33991 863 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 WNT7BP56706 349 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 TDGQ13569 410 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 LIN9Q5TKA1 542 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 RESP18Q5W5W9 173 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 SLFN12LQ6IEE8 588 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 IQUBQ8NA54 791 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 POMGNT1Q8WZA1 660 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 KCNH6Q9H252 994 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 CUEDC2Q9H467 287 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 DUSP12Q9UNI6 340 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 MYO15AQ9UKN7 3530 aa15.67■□□□□ 0.1
HMGN3-201ENST00000275036 DMDP11532 3685 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 M0QZQ0 153 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 LAMP2P13473 410 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 HOXA9P31269 272 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 AARSP49588 968 aaKnown RBP eCLIP15.66■□□□□ 0.1
HMGN3-201ENST00000275036 CWF19L1Q69YN2 538 aaKnown RBP15.66■□□□□ 0.1
HMGN3-201ENST00000275036 POTEHQ6S545 545 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 CCDC65Q8IXS2 484 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 TMEM105Q8N8V8 129 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 ITFG1Q8TB96 612 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 PHOX2BQ99453 314 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 DNMT3BQ9UBC3 853 aaKnown RBP15.66■□□□□ 0.1
HMGN3-201ENST00000275036 FBXL5Q9UKA1 691 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 CFAP45Q9UL16 551 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 PCDHB13Q9Y5F0 798 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 COL4A3Q01955 1670 aa15.66■□□□□ 0.1
HMGN3-201ENST00000275036 ANHXE9PGG2 379 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 NRG2O14511 850 aaPredicted RBP15.65■□□□□ 0.1
HMGN3-201ENST00000275036 SPTLC1O15269 473 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 ABLIM3O94929 683 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 SEC24AO95486 1093 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 NPR3P17342 541 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 FSHRP23945 695 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 HOXD13P35453 343 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 HTR4Q13639 388 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 TMEM132DQ14C87 1099 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 CNNM4Q6P4Q7 775 aa15.65■□□□□ 0.1
HMGN3-201ENST00000275036 CD302Q8IX05 232 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms