RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 QARSP47897 775 aaKnown RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 ATP2C1P98194 919 aaPredicted RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 ZNF746Q6NUN9 644 aaPredicted RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 C4orf33Q8N1A6 199 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 MTERF3Q96E29 417 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 DYNLL2Q96FJ2 89 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 C17orf80Q9BSJ5 609 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 FANCEQ9HB96 536 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 MOSPD1Q9UJG1 213 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 FEM1BQ9UK73 627 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 POTECB2RU33 542 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 RNF103O00237 685 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 MAGEA4P43358 317 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 PSMC5P62195 406 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 BTKQ06187 659 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 PIGHQ14442 188 aaPredicted RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 DIS3LQ8TF46 1054 aaKnown RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 BTN2A2Q8WVV5 523 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 ELMO2Q96JJ3 720 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 ZIM3Q96PE6 472 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 PCMTD2Q9NV79 361 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 AFF4Q9UHB7 1163 aaKnown RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 XPO7Q9UIA9 1087 aaKnown RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 RALAP11233 206 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 ALX1Q15699 326 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 MB21D2Q8IYB1 491 aaPredicted RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 PTPRN2Q92932 1015 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 TNIP3Q96KP6 325 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 PTCH1Q13635 1447 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 EMSYQ7Z589 1322 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 SNUPNO95149 360 aaKnown RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 TMEM253P0C7T8 217 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 SESN2P58004 480 aaPredicted RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 TBL3Q12788 808 aaKnown RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 NAB2Q15742 525 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 NDUFA5Q16718 116 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 KIF2BQ8N4N8 673 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 RFWD2Q8NHY2 731 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 PCDHB8Q9UN66 801 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 THRAP10827 490 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 PSMC3P17980 439 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 USP11P51784 963 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 TPI1P60174 286 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 TXNRD1Q16881 649 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 ZNF786Q8N393 782 aa9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 FRMD8P1Q9BZ68 369 aaPredicted RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 HERC5Q9UII4 1024 aaKnown RBP9.12□□□□□ -0.95
SCUBE3-201ENST00000274938 FKBP6O75344 327 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 EFNA5P52803 228 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 PDIA5Q14554 519 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 BTBD8Q5XKL5 378 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 ARHGAP17Q68EM7 881 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 SLC35G2Q8TBE7 412 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 UBAP1Q9NZ09 502 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 USE1Q9NZ43 259 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 DBR1Q9UK59 544 aaKnown RBP9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 NUP153P49790 1475 aaKnown RBP9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 USPL1Q5W0Q7 1092 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 SCN4BQ8IWT1 228 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 ERP44Q9BS26 406 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 VCPKMTQ9H867 229 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 ZNF302Q9NR11 478 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 CTNNAL1Q9UBT7 734 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 CYTH3O43739 400 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 EYA4O95677 639 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 Q3C1V9 767 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 ANKRD40Q6AI12 368 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 USP38Q8NB14 1042 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 SYN2Q92777 582 aaPredicted RBP9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 DCLRE1BQ9H816 532 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 TUFT1Q9NNX1 390 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 A8MXQ7 604 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 POLBP06746 335 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 FCGR1AP12314 374 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 DUOXA2Q1HG44 320 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 RINLQ6ZS11 566 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 TRAPPC11Q7Z392 1133 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 CATSPER2Q96P56 530 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 BARHL2Q9NY43 387 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 APEX2Q9UBZ4 518 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 CHMP2BQ9UQN3 213 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 ZNF521Q96K83 1311 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 CPSF1Q10570 1443 aaKnown RBP9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 PDZK1P1A8MUH7 402 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 TK2O00142 265 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 MTSS1O43312 755 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 CAND2O75155 1236 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 KRT20P35900 424 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 RGS4P49798 205 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 PTK6Q13882 451 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 EPHA7Q15375 998 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 SYTL3Q4VX76 610 aa9.11□□□□□ -0.95
SCUBE3-201ENST00000274938 SPDYAQ5MJ70 313 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms