RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 PPP1R16BQ96T49 567 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 HEMGNQ9BXL5 484 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 PRDM11Q9NQV5 511 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MOCS1Q9NZB8 636 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 A0A087WZG4 1122 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 NCF1BA6NI72 391 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 NCF1CA8MVU1 366 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 CCRL2O00421 344 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 HPGDP15428 266 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 HNF4AP41235 474 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 PTPN9P43378 593 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 PHKA1P46020 1223 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 STX1BP61266 288 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MLC1Q15049 377 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 GPR141Q7Z602 305 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 AVL9Q8NBF6 648 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 VTA1Q9NP79 307 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 NGRNQ9NPE2 291 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 IQSEC2Q5JU85 1478 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 FOXO3O43524 673 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 NIPSNAP2O75323 286 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ALAS1P13196 640 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 SYT1P21579 422 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 FGFR2P21802 821 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 CYP4F2P78329 520 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 CYP4F3Q08477 520 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 PUDPQ08623 228 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 SNRNP48Q6IEG0 339 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 CDH24Q86UP0 819 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 FUKQ8N0W3 1084 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 SNX29Q8TEQ0 813 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 CCDC12Q8WUD4 166 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 HEXDCQ8WVB3 486 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 MTFMTQ96DP5 389 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 AGLP35573 1532 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 UPP2O95045 317 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 SEC24BO95487 1268 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 GUCY1A2P33402 732 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 HTR2BP41595 481 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ZSCAN25Q6NSZ9 544 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 DSG4Q86SJ6 1040 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 FAM163AQ96GL9 167 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 FAM32AQ9Y421 112 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 WDR19Q8NEZ3 1342 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 H3BRJ5 948 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 SFTPCP11686 197 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 IL13P35225 146 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ACY1Q03154 408 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 NFYCQ13952 458 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 MORF4L2Q15014 288 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 CTC1Q2NKJ3 1217 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 VARS2Q5ST30 1063 aaKnown RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 CCDC149Q6ZUS6 474 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ADCK1Q86TW2 530 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 NLRP10Q86W26 655 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 SLC22A9Q8IVM8 553 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 CCDC28AQ8IWP9 274 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 BBS7Q8IWZ6 715 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ANKRD35Q8N283 1001 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 OR6C4Q8NGE1 309 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 TTC8Q8TAM2 541 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 TUBGCP3Q96CW5 907 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ACSBG1Q96GR2 724 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 PPP1R13BQ96KQ4 1090 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 TNKS2Q9H2K2 1166 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 SEMA4AQ9H3S1 761 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 OSGEPL1Q9H4B0 414 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 ANLNQ9NQW6 1124 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 POLE3Q9NRF9 147 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 BLOC1S4Q9NUP1 217 aa9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 IFT80Q9P2H3 777 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL-201ENST00000273179 FAM47E-STBD1D6RA91 191 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 ATP6V1G2O95670 118 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 STARD3NLO95772 234 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 DNTTP04053 509 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 CHN1P15882 459 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 RAD52P43351 418 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 ATXN1P54253 815 aaKnown RBP9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF124Q15973 351 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 USP39Q53GS9 565 aaKnown RBP9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 SNX30Q5VWJ9 437 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 C11orf88Q6PI97 169 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 PHC2Q8IXK0 858 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 FANK1Q8TC84 345 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 PDCD6IPQ8WUM4 868 aaKnown RBP9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF285Q96NJ3 590 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 NAPBQ9H115 298 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 GBA3Q9H227 469 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 C20orf96Q9NUD7 363 aaPredicted RBP9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 CTNNAL1Q9UBT7 734 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 PTPRUQ92729 1446 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 MYBP10242 640 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 PON1P27169 355 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 PODNQ7Z5L7 613 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 EXOC3L1Q86VI1 746 aa9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 MRPL50Q8N5N7 158 aaKnown RBP9.35□□□□□ -0.91
CTDSPL-201ENST00000273179 SNX31Q8N9S9 440 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms