RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TAS2R14Q9NYV8 317 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 CDC23Q9UJX2 597 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 PIN4Q9Y237 131 aaKnown RBP17.55■□□□□ 0.4
TPM1-201ENST00000267996 NOC2LQ9Y3T9 749 aaKnown RBP17.55■□□□□ 0.4
TPM1-201ENST00000267996 PCDHGC5Q9Y5F6 944 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 CENPFP49454 3210 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 MOXD2PA6NHM9 499 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 M0QZ92 97 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 CHRNA1P02708 482 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 MMEP08473 750 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ATICP31939 592 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 GRK4P32298 578 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ITGA7Q13683 1181 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ZBTB6Q15916 424 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 DNAAF5Q86Y56 855 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 ALS2CR12Q96Q35 445 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 JRKLQ9Y4A0 524 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 PCDHB4Q9Y5E5 795 aa17.55■□□□□ 0.4
TPM1-201ENST00000267996 NCANO14594 1321 aa17.54■□□□□ 0.4
TPM1-201ENST00000267996 ANKRD62A6NC57 917 aa17.54■□□□□ 0.4
TPM1-201ENST00000267996 RTN2O75298 545 aa17.54■□□□□ 0.4
TPM1-201ENST00000267996 STAU1O95793 577 aaKnown RBP17.54■□□□□ 0.4
TPM1-201ENST00000267996 XKR4Q5GH76 650 aa17.54■□□□□ 0.4
TPM1-201ENST00000267996 TAF3Q5VWG9 929 aa17.54■□□□□ 0.4
TPM1-201ENST00000267996 NXF3Q9H4D5 531 aaKnown RBP17.54■□□□□ 0.4
TPM1-201ENST00000267996 ITGA11Q9UKX5 1188 aa17.54■□□□□ 0.4
TPM1-201ENST00000267996 BUB1O43683 1085 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 MYCNP04198 464 aaPredicted RBP17.53■□□□□ 0.4
TPM1-201ENST00000267996 ATP1A1P05023 1023 aaKnown RBP17.53■□□□□ 0.4
TPM1-201ENST00000267996 ITGB3P05106 788 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 ASPAP45381 313 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 TCEAL1Q15170 157 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 PTGISQ16647 500 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 RBBP8NLQ8NC74 664 aaPredicted RBP17.53■□□□□ 0.4
TPM1-201ENST00000267996 TSPAN18Q96SJ8 248 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 BCO2Q9BYV7 579 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 SEPT11Q9NVA2 429 aaKnown RBP17.53■□□□□ 0.4
TPM1-201ENST00000267996 DPP3Q9NY33 737 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 CNTN3Q9P232 1028 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 PTCH2Q9Y6C5 1203 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
TPM1-201ENST00000267996 TMCO5BA8MYB1 307 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 RECQL4O94761 1208 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 FTLP02792 175 aaPredicted RBP17.52■□□□□ 0.4
TPM1-201ENST00000267996 YARSP54577 528 aaKnown RBP17.52■□□□□ 0.4
TPM1-201ENST00000267996 PTK7Q13308 1070 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 IFI16Q16666 785 aaKnown RBP17.52■□□□□ 0.4
TPM1-201ENST00000267996 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.4
TPM1-201ENST00000267996 TMEM270Q6UE05 265 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 KIF12Q96FN5 646 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 ZMAT2Q96NC0 199 aaKnown RBP17.52■□□□□ 0.4
TPM1-201ENST00000267996 TRIM6Q9C030 488 aaPredicted RBP17.52■□□□□ 0.4
TPM1-201ENST00000267996 CXCL16Q9H2A7 254 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 CISHQ9NSE2 258 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 HES2Q9Y543 173 aa17.52■□□□□ 0.4
TPM1-201ENST00000267996 FRMPD3Q5JV73 1810 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 GRID2IPA4D2P6 1211 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 ENC1O14682 589 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 RPS6KA5O75582 802 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 KRT19P08727 400 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 PRLRP16471 622 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 RBP5P82980 135 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 CLEC16AQ2KHT3 1053 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 ZNF667Q5HYK9 610 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 FAM26DQ5JW98 314 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 TMEM130Q8N3G9 435 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 CTNNBL1Q8WYA6 563 aaPredicted RBP17.52■□□□□ 0.39
TPM1-201ENST00000267996 RFFLQ8WZ73 363 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 CHST12Q9NRB3 414 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 ST3GAL5Q9UNP4 418 aa17.52■□□□□ 0.39
TPM1-201ENST00000267996 PALMO75781 387 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 CALCAP01258 141 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 UNGP13051 313 aaPredicted RBP17.51■□□□□ 0.39
TPM1-201ENST00000267996 KCNE1P15382 129 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 POLR2BP30876 1174 aaKnown RBP17.51■□□□□ 0.39
TPM1-201ENST00000267996 GUCY2FP51841 1108 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 HADHBP55084 474 aaKnown RBP17.51■□□□□ 0.39
TPM1-201ENST00000267996 YWHAEP62258 255 aaKnown RBP17.51■□□□□ 0.39
TPM1-201ENST00000267996 ACAD10Q6JQN1 1059 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 LRRC57Q8N9N7 239 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 SMG8Q8ND04 991 aaKnown RBP17.51■□□□□ 0.39
TPM1-201ENST00000267996 TPCN2Q8NHX9 752 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 GLT1D1Q96MS3 346 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 CARD6Q9BX69 1037 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 CYP3A43Q9HB55 503 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 POLIQ9UNA4 740 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 AGAP1Q9UPQ3 857 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 IPPQ9Y573 584 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 TRIM17Q9Y577 477 aa17.51■□□□□ 0.39
TPM1-201ENST00000267996 PDCD11Q14690 1871 aaKnown RBP17.51■□□□□ 0.39
TPM1-201ENST00000267996 CYP1A1P04798 512 aaPredicted RBP17.5■□□□□ 0.39
TPM1-201ENST00000267996 CTSHP09668 335 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 WEE2P0C1S8 567 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 GNA15P30679 374 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 THPOP40225 353 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 NAP1L1P55209 391 aaKnown RBP17.5■□□□□ 0.39
TPM1-201ENST00000267996 WHAMMP3Q1A5X7 153 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 TRIM72Q6ZMU5 477 aa17.5■□□□□ 0.39
TPM1-201ENST00000267996 SLFN11Q7Z7L1 901 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms