RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SRGAP2O75044 1071 aa12.67□□□□□ -0.38
SRRM4-201ENST00000267260 SFNP31947 248 aa12.67□□□□□ -0.38
SRRM4-201ENST00000267260 ACCSLQ4AC99 568 aa12.67□□□□□ -0.38
SRRM4-201ENST00000267260 AGBL2Q5U5Z8 902 aa12.67□□□□□ -0.38
SRRM4-201ENST00000267260 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
SRRM4-201ENST00000267260 SERHL2Q9H4I8 314 aa12.67□□□□□ -0.38
SRRM4-201ENST00000267260 SERHLQ9NQF3 203 aa12.67□□□□□ -0.38
SRRM4-201ENST00000267260 VPS9D1Q9Y2B5 631 aa12.67□□□□□ -0.38
SRRM4-201ENST00000267260 SMIM31A0A1B0GVY4 71 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 USP39Q53GS9 565 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 KCNN4O15554 427 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 BTKQ06187 659 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 WDR62O43379 1518 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 PHKG1Q16816 387 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 PRPF39Q86UA1 669 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 ZNF786Q8N393 782 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 RFFLQ8WZ73 363 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 PRELPP51888 382 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 EIF3EP60228 445 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 NME3Q13232 169 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 C1DQ13901 141 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 PIGHQ14442 188 aaPredicted RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 PDZK1Q5T2W1 519 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 CATSPER4Q7RTX7 472 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 XPO6Q96QU8 1125 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 REREQ9P2R6 1566 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 FTLP02792 175 aaPredicted RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 VEPH1Q14D04 833 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 MTFR1Q15390 333 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 KBTBD12Q3ZCT8 623 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 GSPT2Q8IYD1 628 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 GRAMD1CQ8IYS0 662 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 FAM9CQ8IZT9 166 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 CENPTQ96BT3 561 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 RIC8BQ9NVN3 520 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 KANSL1LA0AUZ9 987 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 CDK17Q00537 523 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 ZNF544Q6NX49 715 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 ARHGEF26Q96DR7 871 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 HEMGNQ9BXL5 484 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 HDHD2Q9H0R4 259 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 CAAP1Q9H8G2 361 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 TBC1D22BQ9NU19 505 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 TAF4O00268 1085 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 NDUFS3O75489 264 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 GUCA1AP43080 201 aaPredicted RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 DUOXA2Q1HG44 320 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 RSBN1Q5VWQ0 802 aaPredicted RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 UBE2OQ9C0C9 1292 aaKnown RBP12.66□□□□□ -0.38
SRRM4-201ENST00000267260 CACNA2D2Q9NY47 1150 aa12.66□□□□□ -0.38
SRRM4-201ENST00000267260 AKAP5P24588 427 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 ACTR2P61160 394 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 DCAF4L1Q3SXM0 396 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 HERC5Q9UII4 1024 aaKnown RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 STK25O00506 426 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 ALDH1A1P00352 501 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CCT3P49368 545 aaKnown RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 ZNF200P98182 395 aaPredicted RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 PKP1Q13835 747 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 FAM102AQ5T9C2 384 aaPredicted RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 HSPBP1Q9NZL4 362 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 C3orf70A6NLC5 250 aaPredicted RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CYP19A1P11511 503 aaPredicted RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 PPP3CCP48454 512 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 TIPINQ9BVW5 301 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 HDAC6Q9UBN7 1215 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 POLIQ9UNA4 740 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 TRPC5OSA6NMA1 111 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CAND2O75155 1236 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CHN1P15882 459 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 COPRSQ9NQ92 184 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 APRTP07741 180 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CUL4AQ13619 759 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 STX12Q86Y82 276 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 PTPRN2Q92932 1015 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 PPP1R14AQ96A00 147 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 TUFT1Q9NNX1 390 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 UBA2Q9UBT2 640 aaPredicted RBP12.65□□□□□ -0.38
SRRM4-201ENST00000267260 RRM2P31350 389 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CDH6P55285 790 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 TPI1P60174 286 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CYP4A22Q5TCH4 519 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 STKLD1Q8NE28 680 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 CEP44Q9C0F1 390 aa12.65□□□□□ -0.38
SRRM4-201ENST00000267260 MYH1P12882 1939 aa12.65□□□□□ -0.39
SRRM4-201ENST00000267260 MYH2Q9UKX2 1941 aa12.65□□□□□ -0.39
SRRM4-201ENST00000267260 MYH4Q9Y623 1939 aa12.65□□□□□ -0.39
SRRM4-201ENST00000267260 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.39
SRRM4-201ENST00000267260 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 SLC26A4O43511 780 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 ARHGAP22Q7Z5H3 698 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms