RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 ACCSQ96QU6 501 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 PAAF1Q9BRP4 392 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 COLEC11Q9BWP8 271 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 VPS16Q9H269 839 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 IKZF4Q9H2S9 585 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.21
SGCE-201ENST00000265735 TTC26A0AVF1 554 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 C2orf71A6NGG8 1288 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 TISP43B9A030 160 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 AKR1B15C9JRZ8 316 aaPredicted RBP13.7□□□□□ -0.22
SGCE-201ENST00000265735 F8W810 466 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 CSPG5O95196 566 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
SGCE-201ENST00000265735 LTBRP36941 435 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 TNFSF9P41273 254 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 ADAM15Q13444 863 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 KCNC3Q14003 757 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
SGCE-201ENST00000265735 DUSP6Q16828 381 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 GLRA4Q5JXX5 417 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 EPM2AIP1Q7L775 607 aaPredicted RBP13.7□□□□□ -0.22
SGCE-201ENST00000265735 MSTO1Q9BUK6 570 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 TMEM206Q9H813 350 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 UBE2ZQ9H832 354 aaPredicted RBP13.7□□□□□ -0.22
SGCE-201ENST00000265735 ENTPD7Q9NQZ7 604 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 CPSF3Q9UKF6 684 aaKnown RBP13.7□□□□□ -0.22
SGCE-201ENST00000265735 EXOC7Q9UPT5 735 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 ANK1P16157 1881 aa13.7□□□□□ -0.22
SGCE-201ENST00000265735 CASTOR2A6NHX0 329 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 LGALS16A8MUM7 142 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 TMEM189-UBE2V1I3L0A0 370 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 EIF3DO15371 548 aaKnown RBP eCLIP13.69□□□□□ -0.22
SGCE-201ENST00000265735 LILRB3O75022 631 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 PRPF6O94906 941 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 SOD2P04179 222 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 HOXD13P35453 343 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■■□ 22.3
SGCE-201ENST00000265735 POU5F1Q01860 360 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 UBXN1Q04323 297 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 SOX4Q06945 474 aaPredicted RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 ZBTB6Q15916 424 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 PTPN21Q16825 1174 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 PLPP4Q5VZY2 271 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 CCAR2Q8N163 923 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 EFHBQ8N7U6 833 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 TC2NQ8N9U0 490 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 CNOT6LQ96LI5 555 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 CDCA3Q99618 268 aaPredicted RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 TLE6Q9H808 572 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 SLC38A7Q9NVC3 462 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 ADAM28Q9UKQ2 775 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 R3HCC1Q9Y3T6 440 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 A0A1W2PQC6 194 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 PER2O15055 1255 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 ARHGAP6O43182 974 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 STX10O60499 249 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 CXCL14O95715 111 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 CXCL8P10145 99 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 NRIP1P48552 1158 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 TFF2Q03403 129 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 HSP90AA2PQ14568 343 aaPredicted RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 ENOX2Q16206 610 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 UPP1Q16831 310 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 TMEM184AQ6ZMB5 413 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 STXBP4Q6ZWJ1 553 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 TAS1R1Q7RTX1 841 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 RBM23Q86U06 439 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 CNGA4Q8IV77 575 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 UROC1Q96N76 676 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 ASB2Q96Q27 587 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 TSPAN18Q96SJ8 248 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 NAA15Q9BXJ9 866 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 GPR62Q9BZJ7 368 aa13.69□□□□□ -0.22
SGCE-201ENST00000265735 AGO2Q9UKV8 859 aaKnown RBP13.69□□□□□ -0.22
SGCE-201ENST00000265735 BRWD1Q9NSI6 2320 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 LINC01565O15544 149 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 KIF4AO95239 1232 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 GLP2RO95838 553 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
SGCE-201ENST00000265735 GARTP22102 1010 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 MTIF2P46199 727 aaKnown RBP13.68□□□□□ -0.22
SGCE-201ENST00000265735 CLCNKBP51801 687 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 MRPS5P82675 430 aaKnown RBP13.68□□□□□ -0.22
SGCE-201ENST00000265735 BMS1Q14692 1282 aaKnown RBP13.68□□□□□ -0.22
SGCE-201ENST00000265735 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 FUT10Q6P4F1 479 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 CD300LGQ6UXG3 332 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 CRELD2Q6UXH1 353 aaPredicted RBP13.68□□□□□ -0.22
SGCE-201ENST00000265735 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
SGCE-201ENST00000265735 SCFD1Q8WVM8 642 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms