RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 XRCC4Q13426 336 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 SHROOM1Q2M3G4 852 aaPredicted RBP18.05■□□□□ 0.48
SRF-201ENST00000265354 SWSAP1Q6NVH7 229 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 ST13P4Q8IZP2 240 aaPredicted RBP18.05■□□□□ 0.48
SRF-201ENST00000265354 FITM2Q8N6M3 262 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 RMDN3Q96TC7 470 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 C12orf65Q9H3J6 166 aaKnown RBP18.05■□□□□ 0.48
SRF-201ENST00000265354 SAE1Q9UBE0 346 aaPredicted RBP18.05■□□□□ 0.48
SRF-201ENST00000265354 GABBR1Q9UBS5 961 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 AGAP1Q9UPQ3 857 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 TRAF3IP3Q9Y228 551 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 KRT37O76014 449 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 YARSP54577 528 aaKnown RBP18.05■□□□□ 0.48
SRF-201ENST00000265354 PCNX4Q63HM2 1172 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 VTI1AQ96AJ9 217 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 KIAA1683Q9H0B3 1180 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
SRF-201ENST00000265354 ZWINTO95229 277 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 ETS1P14921 441 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 ECE1P42892 770 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 PAPOLAP51003 745 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 ATP13A4Q4VNC1 1196 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 ATP11CQ8NB49 1132 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 TTC8Q8TAM2 541 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 DCAF4Q8WV16 495 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 MTBPQ96DY7 904 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 GRAP2O75791 330 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 LMNAP02545 664 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 APRTP07741 180 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 PPP4CP60510 307 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 SLC35G1Q2M3R5 365 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 SNX30Q5VWJ9 437 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 SLC7A3Q8WY07 619 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 RBM41Q96IZ5 413 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 RMDN2Q96LZ7 410 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 RPS6KC1Q96S38 1066 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 KCTD10Q9H3F6 313 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 ANKRD63C9JTQ0 380 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 BANF1O75531 89 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 ATP6V1B1P15313 513 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 YWHABP31946 246 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 MRPS35P82673 323 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 NR1H3Q13133 447 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 DYNC1I2Q13409 638 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 RRP1BQ14684 758 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 NOP9Q86U38 636 aaKnown RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 HES6Q96HZ4 224 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 VPS11Q9H270 941 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 NINJ2Q9NZG7 142 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 AJAP1Q9UKB5 411 aaPredicted RBP18.04■□□□□ 0.48
SRF-201ENST00000265354 GTF3C4Q9UKN8 822 aa18.04■□□□□ 0.48
SRF-201ENST00000265354 ZBED1O96006 694 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 ZSWIM2Q8NEG5 633 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 FAM149B1Q96BN6 582 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 MAGEB18Q96M61 343 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 CST8O60676 142 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 HOXA7P31268 230 aaPredicted RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 GCLCP48506 637 aaPredicted RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 SLC12A3P55017 1021 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 PPP3CAQ08209 521 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 CYP4A22Q5TCH4 519 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 CDR2LQ86X02 465 aaPredicted RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 WDR75Q8IWA0 830 aaKnown RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 ZNF341Q9BYN7 854 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 MANSC1Q9H8J5 431 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 BTNL9Q6UXG8 535 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 RAPH1Q70E73 1250 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 LDHDQ86WU2 507 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 MYLK4Q86YV6 388 aaPredicted RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 TTC25Q96NG3 672 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 TBC1D10AQ9BXI6 508 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 CCDC78A2IDD5 438 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 ASTE1Q2TB18 679 aaPredicted RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 CC2D2BQ6DHV5 1058 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 FAM81BQ96LP2 452 aa18.03■□□□□ 0.48
SRF-201ENST00000265354 XAB2Q9HCS7 855 aaKnown RBP18.03■□□□□ 0.48
SRF-201ENST00000265354 A0A0A6YYK5 440 aaPredicted RBP18.02■□□□□ 0.48
SRF-201ENST00000265354 ATP9AO75110 1047 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 MX2P20592 715 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 ADRA1DP25100 572 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 MMP13P45452 471 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 ORC1Q13415 861 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 MAP7D3Q8IWC1 876 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 ZFPM1Q8IX07 1006 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 CENPKQ9BS16 269 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 PSMC3IPQ9P2W1 217 aaPredicted RBP18.02■□□□□ 0.48
SRF-201ENST00000265354 LZTS1Q9Y250 596 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 SCINQ9Y6U3 715 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.02■□□□□ 0.48
SRF-201ENST00000265354 NOL3O60936 208 aaKnown RBP18.02■□□□□ 0.48
SRF-201ENST00000265354 WEE2P0C1S8 567 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 ANXA13P27216 316 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 TRIP10Q15642 601 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 C11orf63Q6NUN7 778 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 DEPDC1BQ8WUY9 529 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms