RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 FMO5P49326 533 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 CLCNKBP51801 687 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 RBP5P82980 135 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 KCNH2Q12809 1159 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 KCNJ12Q14500 433 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 CCDC40Q4G0X9 1142 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 KRT39Q6A163 491 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 LMO3Q8TAP4 145 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 TAF4BQ92750 862 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 FAM193BQ96PV7 902 aaPredicted RBP15.4■□□□□ 0.06
SSBP1-201ENST00000265304 TUBGCP2Q9BSJ2 902 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 SPG21Q9NZD8 308 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 PCDHB12Q9Y5F1 795 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.4■□□□□ 0.06
SSBP1-201ENST00000265304 ATG2AQ2TAZ0 1938 aa15.4■□□□□ 0.06
SSBP1-201ENST00000265304 M0QZQ0 153 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 PODXLO00592 558 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 N4BP1O75113 896 aaKnown RBP15.39■□□□□ 0.05
SSBP1-201ENST00000265304 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.05
SSBP1-201ENST00000265304 ASS1P00966 412 aaKnown RBP15.39■□□□□ 0.05
SSBP1-201ENST00000265304 TRIM49P0CI25 452 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 TRIM49CP0CI26 452 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 IBSPP21815 317 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-201ENST00000265304 PNPLA4P41247 253 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 GCLMP48507 274 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 LILRA4P59901 499 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 UBE3AQ05086 875 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 KRT31Q15323 416 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 CBWD6Q4V339 395 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 EPC2Q52LR7 807 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 CBWD3Q5JTY5 395 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 CBWD5Q5RIA9 395 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 SCARA3Q6AZY7 606 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 LUZP1Q86V48 1076 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 GAS2L3Q86XJ1 694 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 C3orf58Q8NDZ4 430 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 TIFAQ96CG3 184 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 SUSD3Q96L08 255 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 FAM124BQ9H5Z6 455 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-201ENST00000265304 GOLGA2P5Q9HBQ8 144 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 CHST7Q9NS84 486 aa15.39■□□□□ 0.05
SSBP1-201ENST00000265304 PRRC2BQ5JSZ5 2229 aaKnown RBP15.39■□□□□ 0.05
SSBP1-201ENST00000265304 BRWD1Q9NSI6 2320 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 CASTOR2A6NHX0 329 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 BECN2A8MW95 431 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 H3BNC9 293 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 AFPP02771 609 aaKnown RBP15.38■□□□□ 0.05
SSBP1-201ENST00000265304 ITGB3P05106 788 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 IGFBP6P24592 240 aaPredicted RBP15.38■□□□□ 0.05
SSBP1-201ENST00000265304 MXI1P50539 228 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 GUCY2FP51841 1108 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 VWA3BQ502W6 1294 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 LMBRD2Q68DH5 695 aaPredicted RBP15.38■□□□□ 0.05
SSBP1-201ENST00000265304 DPY19L2P1Q6NXN4 242 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 DPH6Q7L8W6 267 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 DDX53Q86TM3 631 aaKnown RBP15.38■□□□□ 0.05
SSBP1-201ENST00000265304 TMEM173Q86WV6 379 aaPredicted RBP15.38■□□□□ 0.05
SSBP1-201ENST00000265304 FBXL13Q8NEE6 735 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 SPATA18Q8TC71 538 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 BCL7CQ8WUZ0 217 aaPredicted RBP15.38■□□□□ 0.05
SSBP1-201ENST00000265304 FAM84AQ96KN4 292 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 C17orf80Q9BSJ5 609 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 VN1R3Q9BXE9 311 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 NKX2-4Q9H2Z4 354 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 NDST4Q9H3R1 872 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 SLC28A3Q9HAS3 691 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 MAGEC2Q9UBF1 373 aaPredicted RBP15.38■□□□□ 0.05
SSBP1-201ENST00000265304 ADAM28Q9UKQ2 775 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 TSC2P49815 1807 aa15.38■□□□□ 0.05
SSBP1-201ENST00000265304 MTCL1Q9Y4B5 1905 aaKnown RBP15.37■□□□□ 0.05
SSBP1-201ENST00000265304 PPEF2O14830 753 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 SPTLC1O15269 473 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 FGF18O76093 207 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 B3GAT3O94766 335 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 KIF4AO95239 1232 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 CYP11A1P05108 521 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 ITGB1P05556 798 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 ATP1A3P13637 1013 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 POU3F3P20264 500 aaPredicted RBP15.37■□□□□ 0.05
SSBP1-201ENST00000265304 FGFR3P22607 806 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 POLR2BP30876 1174 aaKnown RBP15.37■□□□□ 0.05
SSBP1-201ENST00000265304 OR1G1P47890 313 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 TAF6P49848 677 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 ELAVL2Q12926 359 aaKnown RBP15.37■□□□□ 0.05
SSBP1-201ENST00000265304 NCOA4Q13772 614 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 SPPL3Q8TCT6 385 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 TAS1R2Q8TE23 839 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 C11orf84Q9BUA3 381 aaPredicted RBP15.37■□□□□ 0.05
SSBP1-201ENST00000265304 AGAP1Q9UPQ3 857 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 IRAK3Q9Y616 596 aa15.37■□□□□ 0.05
SSBP1-201ENST00000265304 CDH23Q9H251 3354 aa15.36■□□□□ 0.05
SSBP1-201ENST00000265304 F8W810 466 aa15.36■□□□□ 0.05
SSBP1-201ENST00000265304 SYN3O14994 580 aa15.36■□□□□ 0.05
SSBP1-201ENST00000265304 TRAPPC3O43617 180 aa15.36■□□□□ 0.05
SSBP1-201ENST00000265304 LILRB3O75022 631 aa15.36■□□□□ 0.05
SSBP1-201ENST00000265304 HLA-DRAP01903 254 aa15.36■□□□□ 0.05
SSBP1-201ENST00000265304 MTIF2P46199 727 aaKnown RBP15.36■□□□□ 0.05
SSBP1-201ENST00000265304 COPB1P53618 953 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms