RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MCM3APO60318 1980 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 B4GALT4O60513 344 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 HOXC6P09630 235 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
MSH3-201ENST00000265081 CBLBQ13191 982 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 PPIL2Q13356 520 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 MXD4Q14582 209 aaPredicted RBP11.9□□□□□ -0.5
MSH3-201ENST00000265081 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 TARS2Q9BW92 718 aaKnown RBP11.9□□□□□ -0.5
MSH3-201ENST00000265081 DCLK3Q9C098 648 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 FAM124BQ9H5Z6 455 aaPredicted RBP11.9□□□□□ -0.5
MSH3-201ENST00000265081 MTUS1Q9ULD2 1270 aa11.9□□□□□ -0.5
MSH3-201ENST00000265081 RBM47A0AV96 593 aaKnown RBP11.9□□□□□ -0.51
MSH3-201ENST00000265081 MMP13P45452 471 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 ACOT2P49753 483 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 NOP14P78316 857 aaKnown RBP11.9□□□□□ -0.51
MSH3-201ENST00000265081 DRP2Q13474 957 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 SCARA3Q6AZY7 606 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 C6orf89Q6UWU4 347 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 CROCCP2Q86T23 111 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 ANKRD35Q8N283 1001 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 ARFGAP2Q8N6H7 521 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 CYFIP2Q96F07 1278 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 BICD1Q96G01 975 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 CHORDC1Q9UHD1 332 aaPredicted RBP11.9□□□□□ -0.51
MSH3-201ENST00000265081 SCINQ9Y6U3 715 aa11.9□□□□□ -0.51
MSH3-201ENST00000265081 TRAPPC3O43617 180 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 ASPAP45381 313 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 ZNF252P-AS1Q0IIN9 211 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 SLMAPQ14BN4 828 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 PLCB4Q15147 1175 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 SURF1Q15526 300 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 SPOPLQ6IQ16 392 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 OR2W6PQ8NHA6 318 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 EXD1Q8NHP7 514 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 MAGOHBQ96A72 148 aaKnown RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 EMID1Q96A84 441 aaPredicted RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 MRPL4Q9BYD3 311 aaKnown RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 BCO2Q9BYV7 579 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 DPH5Q9H2P9 285 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 VRTNQ9H8Y1 702 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 ANAPC7Q9UJX3 599 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 MYO1CO00159 1063 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 MEFVO15553 781 aaPredicted RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 SORBS3O60504 671 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 MAPK4P31152 587 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 PPP2R2AP63151 447 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 TAZQ16635 292 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 NAA35Q5VZE5 725 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 KCTD16Q68DU8 428 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 RBBP8NLQ8NC74 664 aaPredicted RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 FNBP1Q96RU3 617 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 TRIM7Q9C029 511 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 TSPYL1Q9H0U9 437 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 C2orf40Q9H1Z8 148 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 HOMER3Q9NSC5 361 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 RBPJLQ9UBG7 517 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 PASKQ96RG2 1323 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 RIPK2O43353 540 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 KLRC2P26717 231 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 USP8P40818 1118 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 LAMTOR4Q0VGL1 99 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 PDCLQ13371 301 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 BYSLQ13895 437 aaKnown RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 MAMDC4Q6UXC1 1216 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 TRMT10CQ7L0Y3 403 aaKnown RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 ERO1BQ86YB8 467 aa11.89□□□□□ -0.51
MSH3-201ENST00000265081 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 CNOT10Q9H9A5 744 aaKnown RBP11.89□□□□□ -0.51
MSH3-201ENST00000265081 TMEM191CA6NGB0 347 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 OGTO15294 1046 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 FAM107AO95990 144 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 CALCAP01258 141 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 TMEM191BP0C7N4 346 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 GNA15P30679 374 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 NCOA4Q13772 614 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 SEPT14Q6ZU15 432 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 CPA5Q8WXQ8 436 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 ZBTB9Q96C00 473 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 FAM84AQ96KN4 292 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 PLVAPQ9BX97 442 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 MRPL47Q9HD33 250 aaKnown RBP11.88□□□□□ -0.51
MSH3-201ENST00000265081 SPOPO43791 374 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 SHBGP04278 402 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 ITIH2P19823 946 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 CAV1Q03135 178 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 CCNG2Q16589 344 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 DNAJC21Q5F1R6 531 aaKnown RBP11.88□□□□□ -0.51
MSH3-201ENST00000265081 ANKS1BQ7Z6G8 1248 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 WDTC1Q8N5D0 677 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 ELMO3Q96BJ8 720 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
MSH3-201ENST00000265081 ROPN1BQ9BZX4 212 aaPredicted RBP11.88□□□□□ -0.51
MSH3-201ENST00000265081 ROPN1Q9HAT0 212 aaPredicted RBP11.88□□□□□ -0.51
MSH3-201ENST00000265081 EURLQ9NYK6 297 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms