RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 KCNH6Q9H252 994 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 IKZF4Q9H2S9 585 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 SMOC2Q9H3U7 446 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 OLFML3Q9NRN5 406 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 TBC1D7Q9P0N9 293 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 IGSF9Q9P2J2 1179 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 EPS15L1Q9UBC2 864 aa17.48■□□□□ 0.39
USE1-201ENST00000263897 AGO2Q9UKV8 859 aaKnown RBP17.48■□□□□ 0.39
USE1-201ENST00000263897 XYLBO75191 536 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 F13A1P00488 732 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 LAMP2P13473 410 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 PLA2G5P39877 138 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 ROR1Q01973 937 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 KCNA1Q09470 495 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 TDGQ13569 410 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 SPATA1Q5VX52 437 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 GRASPQ7Z6J2 395 aaPredicted RBP17.47■□□□□ 0.39
USE1-201ENST00000263897 SPRYD3Q8NCJ5 442 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 APPL2Q8NEU8 664 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 PANK4Q9NVE7 773 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 FBXL5Q9UKA1 691 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 PCDHB8Q9UN66 801 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 PCDHB13Q9Y5F0 798 aa17.47■□□□□ 0.39
USE1-201ENST00000263897 FRMD3A2A2Y4 597 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 M0QZQ0 153 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 CCL16O15467 120 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 POU2F2P09086 479 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 ADSSP30520 456 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 GUCY2FP51841 1108 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 POU5F1Q01860 360 aaKnown RBP17.46■□□□□ 0.39
USE1-201ENST00000263897 E2F4Q16254 413 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 CTXN3Q4LDR2 81 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 L1TD1Q5T7N2 865 aaKnown RBP17.46■□□□□ 0.39
USE1-201ENST00000263897 ATL3Q6DD88 541 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 JADE1Q6IE81 842 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 SHC4Q6S5L8 630 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 SUGP1Q8IWZ8 645 aaKnown RBP17.46■□□□□ 0.39
USE1-201ENST00000263897 ACCSQ96QU6 501 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 LRRC27Q9C0I9 530 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 ASB7Q9H672 318 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 POLIQ9UNA4 740 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 EXOC7Q9UPT5 735 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 DERAQ9Y315 318 aa17.46■□□□□ 0.39
USE1-201ENST00000263897 WDR27A2RRH5 827 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 GCNT3O95395 438 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 PDGFBP01127 241 aaPredicted RBP17.45■□□□□ 0.38
USE1-201ENST00000263897 ATF2P15336 505 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 FSHRP23945 695 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 ELF1P32519 619 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 AARSP49588 968 aaKnown RBP eCLIP17.45■□□□□ 0.38
USE1-201ENST00000263897 ARPP19P56211 112 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 NTHL1P78549 312 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 ALCAMQ13740 583 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 PKP1Q13835 747 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 FOXD4L6Q3SYB3 417 aaPredicted RBP17.45■□□□□ 0.38
USE1-201ENST00000263897 TPGS2Q68CL5 300 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 CRELD2Q6UXH1 353 aaPredicted RBP17.45■□□□□ 0.38
USE1-201ENST00000263897 FOXD4L3Q6VB84 417 aaPredicted RBP17.45■□□□□ 0.38
USE1-201ENST00000263897 TCEAL8Q8IYN2 117 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 BEST2Q8NFU1 509 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 RSAD2Q8WXG1 361 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 POMGNT1Q8WZA1 660 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 NXPE3Q969Y0 559 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 CUEDC2Q9H467 287 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 KBTBD4Q9NVX7 518 aa17.45■□□□□ 0.38
USE1-201ENST00000263897 ZFP37Q9Y6Q3 630 aaPredicted RBP17.45■□□□□ 0.38
USE1-201ENST00000263897 NOTCH4Q99466 2003 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 ARHGEF37A1IGU5 675 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 OAZ2O95190 189 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 NFICP08651 508 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 PAX3P23760 479 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 CASP5P51878 434 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 LILRA4P59901 499 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 TMEM132DQ14C87 1099 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 ZNF280DQ6N043 979 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 GET4Q7L5D6 327 aaPredicted RBP17.44■□□□□ 0.38
USE1-201ENST00000263897 CCDC65Q8IXS2 484 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 SLC44A3Q8N4M1 653 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 IQUBQ8NA54 791 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 TNMDQ9H2S6 317 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 DNMT3BQ9UBC3 853 aaKnown RBP17.44■□□□□ 0.38
USE1-201ENST00000263897 CFAP45Q9UL16 551 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 TIMM13Q9Y5L4 95 aaPredicted RBP17.44■□□□□ 0.38
USE1-201ENST00000263897 ANK1P16157 1881 aa17.44■□□□□ 0.38
USE1-201ENST00000263897 ANO9A1A5B4 782 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 PIRO00625 290 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 PPEF2O14830 753 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 SEC24AO95486 1093 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 AVPR2P30518 371 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 AMPD3Q01432 767 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 YWHAHQ04917 246 aaPredicted RBP17.43■□□□□ 0.38
USE1-201ENST00000263897 IER5LQ5T953 404 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 C9orf57Q5W0N0 161 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 DSTYKQ6XUX3 929 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 SYCP3Q8IZU3 236 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 DHX58Q96C10 678 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 OXCT2Q9BYC2 517 aaPredicted RBP17.43■□□□□ 0.38
USE1-201ENST00000263897 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 CYP4F11Q9HBI6 524 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms