RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 VAMP7P51809 220 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 PLCB3Q01970 1234 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 BFSP1Q12934 665 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 VPS52Q8N1B4 723 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 ELMO3Q96BJ8 720 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 ANO10Q9NW15 660 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 DACH1Q9UI36 760 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 COL6A3P12111 3177 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 PLXNA3P51805 1871 aa19.81■□□□□ 0.76
SDF4-201ENST00000263741 CA8P35219 290 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 KRT17Q04695 432 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 DCAF17Q5H9S7 520 aaPredicted RBP19.8■□□□□ 0.76
SDF4-201ENST00000263741 PLPP4Q5VZY2 271 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 MICALL1Q8N3F8 863 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 BORCS6Q96GS4 357 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 ANKRD36BP1Q96IX9 119 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 BRWD1Q9NSI6 2320 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 SPTLC1O15269 473 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 TNNC2P02585 160 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 KRT13P13646 458 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 SURF1Q15526 300 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 ANO6Q4KMQ2 910 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 HS1BP3Q53T59 392 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 DCLRE1AQ6PJP8 1040 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 INTS8Q75QN2 995 aaKnown RBP19.8■□□□□ 0.76
SDF4-201ENST00000263741 CXorf38Q8TB03 319 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 DDX27Q96GQ7 796 aaKnown RBP19.8■□□□□ 0.76
SDF4-201ENST00000263741 TCF25Q9BQ70 676 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 MKNK1Q9BUB5 465 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 ENTPD7Q9NQZ7 604 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 TLR9Q9NR96 1032 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 NUB1Q9Y5A7 615 aa19.8■□□□□ 0.76
SDF4-201ENST00000263741 C2CD2LO14523 706 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 SLC16A3O15427 465 aaKnown RBP19.79■□□□□ 0.76
SDF4-201ENST00000263741 RPL9P32969 192 aaKnown RBP19.79■□□□□ 0.76
SDF4-201ENST00000263741 DUOXA2Q1HG44 320 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 CCDC40Q4G0X9 1142 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 TDRD10Q5VZ19 366 aaKnown RBP19.79■□□□□ 0.76
SDF4-201ENST00000263741 DDX53Q86TM3 631 aaKnown RBP19.79■□□□□ 0.76
SDF4-201ENST00000263741 NT5DC4Q86YG4 428 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 CACTINQ8WUQ7 758 aaKnown RBP19.79■□□□□ 0.76
SDF4-201ENST00000263741 CEP63Q96MT8 703 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 TSPAN18Q96SJ8 248 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 AGAP1Q9UPQ3 857 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 SF3B1O75533 1304 aaKnown RBP eCLIP19.79■□□□□ 0.761e-7■■■■■ 105.8
SDF4-201ENST00000263741 ANO9A1A5B4 782 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 TMEM189-UBE2V1I3L0A0 370 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 MAPK13O15264 365 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 GCLMP48507 274 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 PPP3CAQ08209 521 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 BIRC3Q13489 604 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 TIGD5Q53EQ6 642 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 FAM171A1Q5VUB5 890 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 TCERG1LQ5VWI1 586 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 LRSAM1Q6UWE0 723 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 TRAPPC11Q7Z392 1133 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 CEP57Q86XR8 500 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 CREBRFQ8IUR6 639 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 TMC2Q8TDI7 906 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 GAS2L1Q99501 681 aaPredicted RBP19.79■□□□□ 0.76
SDF4-201ENST00000263741 FUCA2Q9BTY2 467 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 ZBP1Q9H171 429 aa19.79■□□□□ 0.76
SDF4-201ENST00000263741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.79■□□□□ 0.762e-7■■■■■ 52.5
SDF4-201ENST00000263741 PIRO00625 290 aa19.78■□□□□ 0.76
SDF4-201ENST00000263741 EFEMP2O95967 443 aa19.78■□□□□ 0.76
SDF4-201ENST00000263741 ERCC5P28715 1186 aaPredicted RBP19.78■□□□□ 0.76
SDF4-201ENST00000263741 TPD52L1Q16890 204 aaPredicted RBP19.78■□□□□ 0.76
SDF4-201ENST00000263741 RTP2Q5QGT7 225 aa19.78■□□□□ 0.76
SDF4-201ENST00000263741 FOXR2Q6PJQ5 311 aa19.78■□□□□ 0.76
SDF4-201ENST00000263741 ZSCAN30Q86W11 494 aa19.78■□□□□ 0.76
SDF4-201ENST00000263741 RNF168Q8IYW5 571 aaPredicted RBP19.78■□□□□ 0.76
SDF4-201ENST00000263741 MICAL1Q8TDZ2 1067 aa19.78■□□□□ 0.76
SDF4-201ENST00000263741 ARMCX3Q9UH62 379 aaPredicted RBP19.78■□□□□ 0.76
SDF4-201ENST00000263741 PUF60Q9UHX1 559 aaKnown RBP19.78■□□□□ 0.76
SDF4-201ENST00000263741 HIDE1A8MVS5 230 aa19.77■□□□□ 0.76
SDF4-201ENST00000263741 FOSL2P15408 326 aa19.77■□□□□ 0.76
SDF4-201ENST00000263741 TKTP29401 623 aaKnown RBP19.77■□□□□ 0.76
SDF4-201ENST00000263741 TMC7Q7Z402 723 aa19.77■□□□□ 0.76
SDF4-201ENST00000263741 ADGRD2Q7Z7M1 963 aa19.77■□□□□ 0.76
SDF4-201ENST00000263741 MRPL38Q96DV4 380 aaKnown RBP19.77■□□□□ 0.76
SDF4-201ENST00000263741 CNOT6LQ96LI5 555 aaKnown RBP19.77■□□□□ 0.76
SDF4-201ENST00000263741 ITGA11Q9UKX5 1188 aa19.77■□□□□ 0.76
SDF4-201ENST00000263741 LZTS1Q9Y250 596 aa19.77■□□□□ 0.76
SDF4-201ENST00000263741 MTCH2Q9Y6C9 303 aa19.77■□□□□ 0.76
SDF4-201ENST00000263741 SOD2P04179 222 aa19.77■□□□□ 0.75
SDF4-201ENST00000263741 MSNP26038 577 aaKnown RBP19.77■□□□□ 0.75
SDF4-201ENST00000263741 LILRA4P59901 499 aa19.77■□□□□ 0.75
SDF4-201ENST00000263741 CLDN10P78369 228 aa19.77■□□□□ 0.75
SDF4-201ENST00000263741 UBE3AQ05086 875 aa19.77■□□□□ 0.75
SDF4-201ENST00000263741 FILIP1Q7Z7B0 1213 aa19.77■□□□□ 0.75
SDF4-201ENST00000263741 IRF2BP1Q8IU81 584 aa19.77■□□□□ 0.75
SDF4-201ENST00000263741 HERC2P3Q9BVR0 1158 aa19.77■□□□□ 0.75
SDF4-201ENST00000263741 TIMM13Q9Y5L4 95 aaPredicted RBP19.77■□□□□ 0.75
SDF4-201ENST00000263741 CST3P01034 146 aaPredicted RBP19.76■□□□□ 0.75
SDF4-201ENST00000263741 CCDC192P0DO97 292 aa19.76■□□□□ 0.75
SDF4-201ENST00000263741 PRSS55Q6UWB4 352 aaPredicted RBP19.76■□□□□ 0.75
SDF4-201ENST00000263741 SV2AQ7L0J3 742 aa19.76■□□□□ 0.75
SDF4-201ENST00000263741 SAMSN1Q9NSI8 373 aaKnown RBP19.76■□□□□ 0.75
SDF4-201ENST00000263741 NFE2L3Q9Y4A8 694 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms