RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MYH3P11055 1940 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 ARHGAP42A6NI28 874 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 SAT1P21673 171 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 ACAD10Q6JQN1 1059 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 CCDC110Q8TBZ0 833 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 SPDL1Q96EA4 605 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 KREMEN1Q96MU8 473 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 UVRAGQ9P2Y5 699 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 TXNDC9O14530 226 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 CDH16O75309 829 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 RNF8O76064 485 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 RAD23BP54727 409 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 SPIRE1Q08AE8 756 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 DACT2Q5SW24 774 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 C6orf163Q5TEZ5 329 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 CENPUQ71F23 418 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 EXOC3L1Q86VI1 746 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 C1orf131Q8NDD1 294 aaKnown RBP17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 R3HDM2Q9Y2K5 976 aaKnown RBP17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 ANP32DO95626 131 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 PDCD7Q8N8D1 485 aaKnown RBP17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 P3H4Q92791 437 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 RAB3IPQ96QF0 476 aaPredicted RBP17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 FRMPD4Q14CM0 1322 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 CYP3A7-CYP3A51PA0A087WV96 503 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 PPFIA2O75334 1257 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 DESP17661 470 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 CYP3A7P24462 503 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 ANXA13P27216 316 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 RRP1BQ14684 758 aaKnown RBP17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 PPM1NQ8N819 430 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 C7orf31Q8N865 590 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 TMEM8AQ9HCN3 771 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 SLCO1B3Q9NPD5 702 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 CHMP2BQ9UQN3 213 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 CCDC160A6NGH7 325 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 NR3C2P08235 984 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 ITIH2P19823 946 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 MAN1A1P33908 653 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 ACCSLQ4AC99 568 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 LRRN4Q8WUT4 740 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 CYP3A4P08684 503 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 VCAM1P19320 739 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 RASSF2P50749 326 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 TRMT10CQ7L0Y3 403 aaKnown RBP17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 LMNTD2Q8IXW0 634 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 BBOF1Q8ND07 529 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 OTUD5Q96G74 571 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 ATP6V0A4Q9HBG4 840 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 SEPT10Q9P0V9 454 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 SLC12A6Q9UHW9 1150 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 KAT6AQ92794 2004 aa17.13■□□□□ 0.33
PDZRN3-201ENST00000263666 MAPK13O15264 365 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 TJP3O95049 919 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 PSAPP07602 524 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 GTF2H1P32780 548 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 GCLCP48506 637 aaPredicted RBP17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 FMO1Q01740 532 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 PRKCEQ02156 737 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 HADHQ16836 314 aaKnown RBP17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 C1orf228Q6PIY5 440 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 EMC1Q8N766 993 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 PPFIBP2Q8ND30 876 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 NUDCD1Q96RS6 583 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 APOL6Q9BWW8 343 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 C12orf65Q9H3J6 166 aaKnown RBP17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 TXNDC16Q9P2K2 825 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 ENO4A6NNW6 628 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 DKC1O60832 514 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 ATP6V1G2O95670 118 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 CCND2P30279 289 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 ALDH5A1P51649 535 aaPredicted RBP17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 ALCAMQ13740 583 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 RIT2Q99578 217 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 IGKV6D-41A0A0C4DH26 115 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 O00370 1275 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 PHBP35232 272 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 JAM2P57087 298 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 RNASELQ05823 741 aaKnown RBP17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 OR6B2Q6IFH4 312 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 SUGP1Q8IWZ8 645 aaKnown RBP17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 PARD3BQ8TEW8 1205 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 ZFP69BQ9UJL9 534 aa17.12■□□□□ 0.33
PDZRN3-201ENST00000263666 I3L4J1 428 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 KRT76Q01546 638 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 TSNAXIP1Q2TAA8 658 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 SESTD1Q86VW0 696 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 LRRC71Q8N4P6 559 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms