RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 GSCP56915 257 aaPredicted RBP9.7□□□□□ -0.86
MSH4-201ENST00000263187 PSMC5P62195 406 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 MGAT5Q09328 741 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 MTMR2Q13614 643 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 SMTNL2Q2TAL5 461 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 SCARA5Q6ZMJ2 495 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 C3orf20Q8ND61 904 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 NSMCE1Q8WV22 266 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 FAM151AQ8WW52 585 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 RUNDC3BQ96NL0 473 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 STMN4Q9H169 189 aaPredicted RBP9.7□□□□□ -0.86
MSH4-201ENST00000263187 STK32BQ9NY57 414 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 NKIRAS1Q9NYS0 192 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 UVRAGQ9P2Y5 699 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 MCM8Q9UJA3 840 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 DNPEPQ9ULA0 475 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 SLC12A4Q9UP95 1085 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 DNAH12Q6ZR08 3092 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 CEP350Q5VT06 3117 aa9.7□□□□□ -0.86
MSH4-201ENST00000263187 EXOC1LA0A1B0GW35 172 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 LRRIQ4A6NIV6 560 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 DNAJC8O75937 253 aaPredicted RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 ANP32DO95626 131 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 HLA-DRAP01903 254 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 LIG4P49917 911 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 CYP1B1Q16678 543 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 BRDTQ58F21 947 aaPredicted RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 KCNT1Q5JUK3 1230 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 CGB2Q6NT52 195 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 TRMT10CQ7L0Y3 403 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 ZBTB33Q86T24 672 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 NLRX1Q86UT6 975 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 CDR2LQ86X02 465 aaPredicted RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 PITPNM3Q9BZ71 974 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 OSBPL8Q9BZF1 889 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 GEMIN8Q9NWZ8 242 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 CNTNAP1P78357 1384 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 F8VP50 259 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 FDX1P10109 184 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 NQO1P15559 274 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 ITIH2P19823 946 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 TARSP26639 723 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 HSD17B4P51659 736 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 HADHBP55084 474 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 OSTNP61366 133 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 GPS1Q13098 491 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 PRKG1Q13976 671 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 EFTUD2Q15029 972 aaKnown RBP eCLIP9.69□□□□□ -0.86
MSH4-201ENST00000263187 WDR44Q5JSH3 913 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 CYP4A22Q5TCH4 519 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 TDRD10Q5VZ19 366 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 MIS18BP1Q6P0N0 1132 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 DPH6Q7L8W6 267 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 FMNL3Q8IVF7 1028 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 ATL2Q8NHH9 583 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 ATG4CQ96DT6 458 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 TMEM121Q9BTD3 319 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 PLVAPQ9BX97 442 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 COL11A2P13942 1736 aaPredicted RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 GREB1LQ9C091 1923 aaPredicted RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 A0A1W2PPM1 405 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 WDR64B1ANS9 1081 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 H0Y3Z8 333 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 GGPS1O95749 300 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 YY1P25490 414 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 GNA15P30679 374 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 GPC3P51654 580 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 ITIH4Q14624 930 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 PKN2Q16513 984 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 ERICH1Q86X53 443 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 ZBED8Q8IZ13 594 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 SUPT20HQ8NEM7 779 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 LRRN4Q8WUT4 740 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 FAM167BQ9BTA0 163 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 POLR3FQ9H1D9 316 aaPredicted RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 APOBEC3GQ9HC16 384 aaKnown RBP9.69□□□□□ -0.86
MSH4-201ENST00000263187 EXOC7Q9UPT5 735 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
MSH4-201ENST00000263187 UBIAD1Q9Y5Z9 338 aa9.69□□□□□ -0.86
MSH4-201ENST00000263187 MYPNQ86TC9 1320 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 UNGP13051 313 aaPredicted RBP9.68□□□□□ -0.86
MSH4-201ENST00000263187 PTGER2P43116 358 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 MAGEA4P43358 317 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 ARSEP51690 589 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 NCKAP1LP55160 1127 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 OVGP1Q12889 678 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 TMEM63BQ5T3F8 832 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 PCNX4Q63HM2 1172 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 RSBN1LQ6PCB5 846 aaPredicted RBP9.68□□□□□ -0.86
MSH4-201ENST00000263187 FAM160B2Q86V87 743 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 MAP4K3Q8IVH8 894 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 GPD1LQ8N335 351 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 OR5B17Q8NGF7 314 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 PDCD2LQ9BRP1 358 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 TARS2Q9BW92 718 aaKnown RBP9.68□□□□□ -0.86
MSH4-201ENST00000263187 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 YY1AP1Q9H869 796 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 WHRNQ9P202 907 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms