RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ERVK-9P63128 1117 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 LRP8Q14114 963 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 KRT81Q14533 505 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 TRIP10Q15642 601 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 LONRF1Q17RB8 773 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TMEM266Q2M3C6 531 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 KHDC1Q4VXA5 237 aaKnown RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 KAZNQ674X7 775 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 EPS8L3Q8TE67 593 aaKnown RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 DGCR14Q96DF8 476 aaKnown RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 RTFDC1Q9BY42 306 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 GOLPH3Q9H4A6 298 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 UBN1Q9NPG3 1134 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 ARHGEF3Q9NR81 526 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 REXO2Q9Y3B8 237 aaKnown RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 FADS3Q9Y5Q0 445 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 MYO3BQ8WXR4 1341 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 GOLGA8IPA6NC78 632 aa8.83□□□□□ -1
LDB3-201ENST00000263066 GOLGA8TH3BQL2 631 aa8.83□□□□□ -1
LDB3-201ENST00000263066 CCDC22O60826 627 aa8.83□□□□□ -1
LDB3-201ENST00000263066 CTDNEP1O95476 244 aa8.83□□□□□ -1
LDB3-201ENST00000263066 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 RILPL1Q5EBL4 403 aa8.83□□□□□ -1
LDB3-201ENST00000263066 SNRNP48Q6IEG0 339 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 C11orf74Q86VG3 221 aa8.83□□□□□ -1
LDB3-201ENST00000263066 HEATR4Q86WZ0 1026 aa8.83□□□□□ -1
LDB3-201ENST00000263066 GSDMAQ96QA5 445 aa8.83□□□□□ -1
LDB3-201ENST00000263066 ASIC3Q9UHC3 531 aa8.83□□□□□ -1
LDB3-201ENST00000263066 NOP56O00567 594 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 FBP2O00757 339 aa8.83□□□□□ -1
LDB3-201ENST00000263066 AGTP01019 485 aa8.83□□□□□ -1
LDB3-201ENST00000263066 PORP16435 677 aaPredicted RBP8.83□□□□□ -1
LDB3-201ENST00000263066 CDH3P22223 829 aa8.83□□□□□ -1
LDB3-201ENST00000263066 GNA11P29992 359 aa8.83□□□□□ -1
LDB3-201ENST00000263066 EPHB1P54762 984 aa8.83□□□□□ -1
LDB3-201ENST00000263066 TUBA1BP68363 451 aa8.83□□□□□ -1
LDB3-201ENST00000263066 KLHL30Q0D2K2 578 aa8.83□□□□□ -1
LDB3-201ENST00000263066 ASPHQ12797 758 aa8.83□□□□□ -1
LDB3-201ENST00000263066 ARHGEF16Q5VV41 709 aa8.83□□□□□ -1
LDB3-201ENST00000263066 TUBA1AQ71U36 451 aa8.83□□□□□ -1
LDB3-201ENST00000263066 REXO1Q8N1G1 1221 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 RNF169Q8NCN4 708 aa8.83□□□□□ -1
LDB3-201ENST00000263066 RSPH1Q8WYR4 309 aa8.83□□□□□ -1
LDB3-201ENST00000263066 GLG1Q92896 1179 aa8.83□□□□□ -1
LDB3-201ENST00000263066 PPP2R3CQ969Q6 453 aa8.83□□□□□ -1
LDB3-201ENST00000263066 CCDC17Q96LX7 622 aa8.83□□□□□ -1
LDB3-201ENST00000263066 RILPQ96NA2 401 aa8.83□□□□□ -1
LDB3-201ENST00000263066 ARMC7Q9H6L4 198 aa8.83□□□□□ -1
LDB3-201ENST00000263066 RPAP3Q9H6T3 665 aaPredicted RBP8.83□□□□□ -1
LDB3-201ENST00000263066 ADARB2Q9NS39 739 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 GPRC5DQ9NZD1 345 aa8.83□□□□□ -1
LDB3-201ENST00000263066 APPL1Q9UKG1 709 aa8.83□□□□□ -1
LDB3-201ENST00000263066 NOD1Q9Y239 953 aa8.83□□□□□ -1
LDB3-201ENST00000263066 GDAQ9Y2T3 454 aa8.83□□□□□ -1
LDB3-201ENST00000263066 DEXIO95424 95 aa8.83□□□□□ -1
LDB3-201ENST00000263066 CYP2C8P10632 490 aa8.83□□□□□ -1
LDB3-201ENST00000263066 CYP2B6P20813 491 aa8.83□□□□□ -1
LDB3-201ENST00000263066 ASIC1P78348 528 aa8.83□□□□□ -1
LDB3-201ENST00000263066 LPIN1Q14693 890 aa8.83□□□□□ -1
LDB3-201ENST00000263066 PDCD4Q53EL6 469 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 MDH1BQ5I0G3 518 aa8.83□□□□□ -1
LDB3-201ENST00000263066 METTL21CQ5VZV1 264 aa8.83□□□□□ -1
LDB3-201ENST00000263066 DYMQ7RTS9 669 aa8.83□□□□□ -1
LDB3-201ENST00000263066 EXOC3L1Q86VI1 746 aa8.83□□□□□ -1
LDB3-201ENST00000263066 SLC25A41Q8N5S1 370 aa8.83□□□□□ -1
LDB3-201ENST00000263066 SAMD3Q8N6K7 520 aa8.83□□□□□ -1
LDB3-201ENST00000263066 DUSP9Q99956 384 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 RIOK1Q9BRS2 568 aaKnown RBP8.83□□□□□ -1
LDB3-201ENST00000263066 GDF3Q9NR23 364 aa8.83□□□□□ -1
LDB3-201ENST00000263066 TMEM260Q9NX78 707 aa8.83□□□□□ -1
LDB3-201ENST00000263066 SMIM31A0A1B0GVY4 71 aa8.82□□□□□ -1
LDB3-201ENST00000263066 GIPC1O14908 333 aa8.82□□□□□ -1
LDB3-201ENST00000263066 THAP12O43422 761 aa8.82□□□□□ -1
LDB3-201ENST00000263066 GAS8O95995 478 aa8.82□□□□□ -1
LDB3-201ENST00000263066 NDUFB10O96000 172 aa8.82□□□□□ -1
LDB3-201ENST00000263066 TFPTP0C1Z6 253 aa8.82□□□□□ -1
LDB3-201ENST00000263066 KRT4P19013 534 aa8.82□□□□□ -1
LDB3-201ENST00000263066 RASA1P20936 1047 aa8.82□□□□□ -1
LDB3-201ENST00000263066 KLK7P49862 253 aa8.82□□□□□ -1
LDB3-201ENST00000263066 ADCY7P51828 1080 aa8.82□□□□□ -1
LDB3-201ENST00000263066 CACNB1Q02641 598 aaPredicted RBP8.82□□□□□ -1
LDB3-201ENST00000263066 PPP2R5BQ15173 497 aa8.82□□□□□ -1
LDB3-201ENST00000263066 TMED2Q15363 201 aa8.82□□□□□ -1
LDB3-201ENST00000263066 TMEM179Q6ZVK1 233 aa8.82□□□□□ -1
LDB3-201ENST00000263066 USP49Q70CQ1 688 aa8.82□□□□□ -1
LDB3-201ENST00000263066 SNX29Q8TEQ0 813 aa8.82□□□□□ -1
LDB3-201ENST00000263066 ATP8B4Q8TF62 1192 aa8.82□□□□□ -1
LDB3-201ENST00000263066 ADAM33Q9BZ11 813 aa8.82□□□□□ -1
LDB3-201ENST00000263066 KLHL4Q9C0H6 718 aa8.82□□□□□ -1
LDB3-201ENST00000263066 CCL15-CCL14A0A0B4J2E2 113 aa8.82□□□□□ -1
LDB3-201ENST00000263066 O00370 1275 aa8.82□□□□□ -1
LDB3-201ENST00000263066 SOCS7O14512 581 aa8.82□□□□□ -1
LDB3-201ENST00000263066 TEX28O15482 410 aa8.82□□□□□ -1
LDB3-201ENST00000263066 TECP42680 631 aa8.82□□□□□ -1
LDB3-201ENST00000263066 KCTD2Q14681 263 aa8.82□□□□□ -1
LDB3-201ENST00000263066 FXNQ16595 210 aa8.82□□□□□ -1
LDB3-201ENST00000263066 CCL15Q16663 113 aa8.82□□□□□ -1
LDB3-201ENST00000263066 PABPC1LQ4VXU2 614 aaKnown RBP8.82□□□□□ -1
LDB3-201ENST00000263066 TAF1BQ53T94 588 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms