RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ALKBH5Q6P6C2 394 aaKnown RBP13.96□□□□□ -0.17
VAMP7-201ENST00000262640 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 OLIG1Q8TAK6 271 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 CXorf38Q8TB03 319 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 LNX1Q8TBB1 728 aaPredicted RBP13.96□□□□□ -0.17
VAMP7-201ENST00000262640 EPS8L1Q8TE68 723 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 ZNF592Q92610 1267 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 VRTNQ9H8Y1 702 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 AGO3Q9H9G7 860 aaKnown RBP13.96□□□□□ -0.17
VAMP7-201ENST00000262640 PARP2Q9UGN5 583 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 NOCTQ9UK39 431 aaKnown RBP13.96□□□□□ -0.17
VAMP7-201ENST00000262640 PADI3Q9ULW8 664 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 GUCA1BQ9UMX6 200 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 CNTN6Q9UQ52 1028 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 RALGAPA2Q2PPJ7 1873 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 GHRP10912 638 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 CKBP12277 381 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 ZSCAN20P17040 1043 aaPredicted RBP13.96□□□□□ -0.18
VAMP7-201ENST00000262640 AKAP5P24588 427 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 CDK7P50613 346 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 XKR4Q5GH76 650 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 GLYCTKQ8IVS8 523 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 BEST2Q8NFU1 509 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 DNAI1Q9UI46 699 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 PAXBP1Q9Y5B6 917 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 PCDHB2Q9Y5E7 798 aa13.96□□□□□ -0.18
VAMP7-201ENST00000262640 STAU1O95793 577 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 ABL1P00519 1130 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 KCNE1P15382 129 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 CYP11B1P15538 503 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 POLR2BP30876 1174 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 CD52P31358 61 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 ZBTB6Q15916 424 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 ZNF667Q5HYK9 610 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 CTU1Q7Z7A3 348 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 NOP9Q86U38 636 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 SLC47A2Q86VL8 602 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 UBR7Q8N806 425 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 CAGE1Q8TC20 777 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 U2AF1L4Q8WU68 220 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 SLC20A1Q8WUM9 679 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 FAM105AQ9NUU6 356 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 UBQLN1Q9UMX0 589 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 TFR2Q9UP52 801 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 PCDHB4Q9Y5E5 795 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 XPOTO43592 962 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 RAB27AP51159 221 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 RPUSD2Q8IZ73 545 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 ZMAT2Q96NC0 199 aaKnown RBP13.95□□□□□ -0.18
VAMP7-201ENST00000262640 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 AGAP1Q9UPQ3 857 aa13.95□□□□□ -0.18
VAMP7-201ENST00000262640 P4HA1P13674 534 aa13.94□□□□□ -0.18
VAMP7-201ENST00000262640 ASPAP45381 313 aa13.94□□□□□ -0.18
VAMP7-201ENST00000262640 CDR2Q01850 454 aa13.94□□□□□ -0.18
VAMP7-201ENST00000262640 ZNF569Q5MCW4 686 aa13.94□□□□□ -0.18
VAMP7-201ENST00000262640 ZNF677Q86XU0 584 aa13.94□□□□□ -0.18
VAMP7-201ENST00000262640 HPDLQ96IR7 371 aa13.94□□□□□ -0.18
VAMP7-201ENST00000262640 IRX2Q9BZI1 471 aaPredicted RBP13.94□□□□□ -0.18
VAMP7-201ENST00000262640 SEPT11Q9NVA2 429 aaKnown RBP13.94□□□□□ -0.18
VAMP7-201ENST00000262640 CITO14578 2027 aa13.94□□□□□ -0.18
VAMP7-201ENST00000262640 SMIM28A0A1B0GU29 152 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 CHRNB2P17787 502 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 CASQ1P31415 396 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 GUCY2FP51841 1108 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 DSC3Q14574 896 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 FBXO46Q6PJ61 603 aaPredicted RBP13.93□□□□□ -0.18
VAMP7-201ENST00000262640 TRAF7Q6Q0C0 670 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 TMEM270Q6UE05 265 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 RBBP8NLQ8NC74 664 aaPredicted RBP13.93□□□□□ -0.18
VAMP7-201ENST00000262640 SECISBP2LQ93073 1101 aaKnown RBP13.93□□□□□ -0.18
VAMP7-201ENST00000262640 WDR24Q96S15 920 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 BCO2Q9BYV7 579 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 BTNL10A8MVZ5 291 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 CD4P01730 458 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 H2AFZP0C0S5 128 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 ITGA4P13612 1032 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 ZNF132P52740 706 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 H2AFVQ71UI9 128 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 MRPL10Q7Z7H8 261 aaKnown RBP13.93□□□□□ -0.18
VAMP7-201ENST00000262640 FAM126BQ8IXS8 530 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 DDX1Q92499 740 aaKnown RBP13.93□□□□□ -0.18
VAMP7-201ENST00000262640 OSBPL7Q9BZF2 842 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 CYP3A43Q9HB55 503 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 KLK14Q9P0G3 267 aa13.93□□□□□ -0.18
VAMP7-201ENST00000262640 NXF1Q9UBU9 619 aaKnown RBP13.93□□□□□ -0.18
VAMP7-201ENST00000262640 MACROD2A1Z1Q3 448 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 TLR3O15455 904 aaKnown RBP13.92□□□□□ -0.18
VAMP7-201ENST00000262640 HSPA8P11142 646 aaKnown RBP13.92□□□□□ -0.18
VAMP7-201ENST00000262640 CYP3A5P20815 502 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 BFSP2Q13515 415 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 GLRA4Q5JXX5 417 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms