RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 KCNJ18B7U540 433 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 PPEF2O14830 753 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 STX10O60499 249 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 KIF4AO95239 1232 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 CST3P01034 146 aaPredicted RBP17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 ITGB1P05556 798 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 EEF1GP26641 437 aaKnown RBP17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 KCNJ12Q14500 433 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 LUZP1Q86V48 1076 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 KLHL23Q8NBE8 558 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 BCL7CQ8WUZ0 217 aaPredicted RBP17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 LRCH3Q96II8 777 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 TMEM8AQ9HCN3 771 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 ADAM28Q9UKQ2 775 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 AGAP1Q9UPQ3 857 aa17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.94■□□□□ 0.46
CHCHD3-201ENST00000262570 TMEM265A0A087WTH1 108 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 FGF18O76093 207 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 EFEMP2O95967 443 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 POLR2BP30876 1174 aaKnown RBP17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 RBP5P82980 135 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 PLCB3Q01970 1234 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 BIRC3Q13489 604 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 KRT39Q6A163 491 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 TMEM169Q96HH4 297 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 ANP32EQ9BTT0 268 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 ZNF576Q9H609 170 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 CERS4Q9HA82 394 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 SZT2Q5T011 3432 aa17.93■□□□□ 0.46
CHCHD3-201ENST00000262570 TADA2AO75478 443 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 VNN1O95497 513 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 KRT19P08727 400 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 MTIF2P46199 727 aaKnown RBP17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 LILRA4P59901 499 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 CBWD6Q4V339 395 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 CBWD3Q5JTY5 395 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 CBWD5Q5RIA9 395 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 LRRC52Q8N7C0 313 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 FBXO22Q8NEZ5 403 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 HASPINQ8TF76 798 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 TUBGCP2Q9BSJ2 902 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 C11orf84Q9BUA3 381 aaPredicted RBP17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 MMRN2Q9H8L6 949 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 KIAA1671Q9BY89 1806 aa17.92■□□□□ 0.46
CHCHD3-201ENST00000262570 H3BNC9 293 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 PMM2O15305 246 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 PHACTR2O75167 634 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 PNPLA4P41247 253 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 FMO5P49326 533 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 AARSP49588 968 aaKnown RBP eCLIP17.91■□□□□ 0.464e-6■■■■■ 30.7
CHCHD3-201ENST00000262570 MXI1P50539 228 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 KRT17Q04695 432 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 MAN2A1Q16706 1144 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 TTYH1Q9H313 450 aaPredicted RBP17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 NUB1Q9Y5A7 615 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 LRRC10BA6NIK2 292 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 SPTLC1O15269 473 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 AFPP02771 609 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 CDK11BP21127 795 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 PAX3P23760 479 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 TAF6P49848 677 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 TRPC3Q13507 836 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 NCOA4Q13772 614 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 FUT10Q6P4F1 479 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 DDX53Q86TM3 631 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 RNF168Q8IYW5 571 aaPredicted RBP17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 SPPL3Q8TCT6 385 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 TAS1R2Q8TE23 839 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 ZNF560Q96MR9 790 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 VN1R3Q9BXE9 311 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 GPR62Q9BZJ7 368 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 ALG13Q9NP73 1137 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 COQ4Q9Y3A0 265 aa17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 R3HCC1Q9Y3T6 440 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-201ENST00000262570 SF3B1O75533 1304 aaKnown RBP eCLIP17.9■□□□□ 0.468e-7■■■■■ 137.9
CHCHD3-201ENST00000262570 EPOPA6NHQ4 379 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 P4HA2O15460 535 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 ATP1A3P13637 1013 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 PRKCSHP14314 528 aaPredicted RBP17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 BRCC3P46736 316 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 MYL6P60660 151 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 GPM6BQ13491 265 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 KRT31Q15323 416 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 TIGD5Q53EQ6 642 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 MIIPQ5JXC2 388 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 FBXL13Q8NEE6 735 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 XYLT2Q9H1B5 865 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 LIMA1Q9UHB6 759 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 LZTS1Q9Y250 596 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 NLRC5Q86WI3 1866 aa17.9■□□□□ 0.46
CHCHD3-201ENST00000262570 KPNA7A9QM74 516 aa17.89■□□□□ 0.45
CHCHD3-201ENST00000262570 TRAPPC3O43617 180 aa17.89■□□□□ 0.45
CHCHD3-201ENST00000262570 N4BP1O75113 896 aaKnown RBP17.89■□□□□ 0.45
CHCHD3-201ENST00000262570 STAU1O95793 577 aaKnown RBP17.89■□□□□ 0.45
CHCHD3-201ENST00000262570 HLA-DRAP01903 254 aa17.89■□□□□ 0.45
CHCHD3-201ENST00000262570 ATICP31939 592 aa17.89■□□□□ 0.45
CHCHD3-201ENST00000262570 UBE3AQ05086 875 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms