RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 MCEEQ96PE7 176 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 TMEM121Q9BTD3 319 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 STMN4Q9H169 189 aaPredicted RBP13.75□□□□□ -0.21
SEC23B-201ENST00000262544 NINJ2Q9NZG7 142 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 NXF1Q9UBU9 619 aaKnown RBP13.75□□□□□ -0.21
SEC23B-201ENST00000262544 PCDHA10Q9Y5I2 948 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 KRT1P04264 644 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 NR3C2P08235 984 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 KRT19P08727 400 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 SRGAP2CP0DJJ0 459 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 GZMAP12544 262 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 HSPA6P17066 643 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 CLNS1AP54105 237 aaKnown RBP13.75□□□□□ -0.21
SEC23B-201ENST00000262544 PRKCEQ02156 737 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 STRN3Q13033 797 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 CLEC16AQ2KHT3 1053 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 VSIG1Q86XK7 387 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 FMNL3Q8IVF7 1028 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 RUNDC3BQ96NL0 473 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 PITPNM3Q9BZ71 974 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 DNPEPQ9ULA0 475 aa13.75□□□□□ -0.21
SEC23B-201ENST00000262544 F8VP50 259 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 SLC26A4O43511 780 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 TTC4O95801 387 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 ARSEP51690 589 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 GAD2Q05329 585 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 MCF2L2Q86YR7 1114 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 OR5B17Q8NGF7 314 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 CD101Q93033 1021 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 RBAKQ9NYW8 714 aaPredicted RBP13.74□□□□□ -0.21
SEC23B-201ENST00000262544 FBXO40Q9UH90 709 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 PCSK1NQ9UHG2 260 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 DCTN4Q9UJW0 460 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 USP15Q9Y4E8 981 aaPredicted RBP13.74□□□□□ -0.21
SEC23B-201ENST00000262544 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 SNX3O60493 162 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 SUN1O94901 812 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 HIRAP54198 1017 aaPredicted RBP13.74□□□□□ -0.21
SEC23B-201ENST00000262544 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
SEC23B-201ENST00000262544 EMC10Q5UCC4 262 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
SEC23B-201ENST00000262544 PAGR1Q9BTK6 254 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 MSTO1Q9BUK6 570 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 TBC1D22BQ9NU19 505 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 UVRAGQ9P2Y5 699 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 AGTPBP1Q9UPW5 1226 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 UBE4BO95155 1302 aa13.74□□□□□ -0.21
SEC23B-201ENST00000262544 ATP6V1G2O95670 118 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 CYP1A2P05177 515 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 RFX1P22670 979 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 CA4P22748 312 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 BRD2P25440 801 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 OVGP1Q12889 678 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 DRP2Q13474 957 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 TDRD10Q5VZ19 366 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 TRIM68Q6AZZ1 485 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 VSTM1Q6UX27 236 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 DLK2Q6UY11 383 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 CCDC33Q8N5R6 958 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 C1orf131Q8NDD1 294 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 DEPTORQ8TB45 409 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 PSPC1Q8WXF1 523 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 MIEF2Q96C03 454 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 STRA6Q9BX79 667 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 DCLK3Q9C098 648 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 AGO2Q9UKV8 859 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 CCDC189A1A4V9 331 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 K7ERI5 159 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 ZBED4O75132 1171 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 TARSP26639 723 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 ALDH5A1P51649 535 aaPredicted RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 TFAMQ00059 246 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 EN1Q05925 392 aaPredicted RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 FSTL1Q12841 308 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 WDR78Q5VTH9 848 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 FITM2Q8N6M3 262 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 DDX1Q92499 740 aaKnown RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 IWS1Q96ST2 819 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 ETNK1Q9HBU6 452 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 PXMP2Q9NR77 195 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 ARMC9Q7Z3E5 817 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 USP37Q86T82 979 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 ATL2Q8NHH9 583 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.73□□□□□ -0.21
SEC23B-201ENST00000262544 KLHL14Q9P2G3 628 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 CNTNAP1P78357 1384 aa13.73□□□□□ -0.21
SEC23B-201ENST00000262544 F5H423 210 aaPredicted RBP13.72□□□□□ -0.21
SEC23B-201ENST00000262544 GRIN3BO60391 1043 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 KRT16P08779 473 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 GTF2H1P32780 548 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 HSD17B4P51659 736 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 SESN3P58005 492 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 EFTUD2Q15029 972 aaKnown RBP eCLIP13.72□□□□□ -0.214e-9■■■■□ 25.2
SEC23B-201ENST00000262544 LIN9Q5TKA1 542 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 PCNX4Q63HM2 1172 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 MIS18BP1Q6P0N0 1132 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 MFSD7Q6UXD7 560 aa13.72□□□□□ -0.21
SEC23B-201ENST00000262544 SLX4Q8IY92 1834 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms