RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 CHUKO15111 745 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 SNX3O60493 162 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 GAS8O95995 478 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 FDX1P10109 184 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 GHRP10912 638 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 KLF1Q13351 362 aaPredicted RBP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 SNCBQ16143 134 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 KAZNQ674X7 775 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 NUGGCQ68CJ6 796 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 GLIS1Q8NBF1 620 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ZNF526Q8TF50 670 aaPredicted RBP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 SERPINB12Q96P63 405 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ADAM22Q9P0K1 906 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 PCDHB4Q9Y5E5 795 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 PROSCO94903 275 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 C4BPAP04003 597 aaKnown RBP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 CYP1A1P04798 512 aaPredicted RBP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 KRT10P13645 584 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 GARTP22102 1010 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 CCND2P30279 289 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 CENPCQ03188 943 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 MAMLD1Q13495 774 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ITIH4Q14624 930 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ZACNQ401N2 412 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 SNRNP48Q6IEG0 339 aaKnown RBP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ATP6V0A1Q93050 837 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ZBED3Q96IU2 234 aaPredicted RBP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ARHGAP28Q9P2N2 729 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 ANKFY1Q9P2R3 1169 aa17.4■□□□□ 0.38
TM9SF1-201ENST00000261789 EXTL3O43909 919 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 DGAT1O75907 488 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 DNAJC8O75937 253 aaPredicted RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 BRAFP15056 766 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ACO1P21399 889 aaKnown RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 CYP4F22Q6NT55 531 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 CRELD2Q6UXH1 353 aaPredicted RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ENOSF1Q7L5Y1 443 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 TBC1D1Q86TI0 1168 aaPredicted RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 SRRM1Q8IYB3 904 aaKnown RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 MTMR14Q8NCE2 650 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 IFT74Q96LB3 600 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 OSBPL8Q9BZF1 889 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 JPH1Q9HDC5 661 aaPredicted RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 SLC12A4Q9UP95 1085 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 NEU2Q9Y3R4 380 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 UBOX5O94941 541 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ZSCAN5DPP0CG00 497 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 HARSP12081 509 aaKnown RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 GNA15P30679 374 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 SLC1A1P43005 524 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ACTR2P61160 394 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 RPL7AP62424 266 aaKnown RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ELF3P78545 371 aaPredicted RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 E2F5Q15329 346 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ZFYVE27Q5T4F4 411 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 PRAMEF18Q5VWM3 479 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ZNF365Q70YC5 407 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 GSTA5Q7RTV2 222 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 AGBL3Q8NEM8 1001 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 TCP11Q8WWU5 503 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 P3H4Q92791 437 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ACSF2Q96CM8 615 aaPredicted RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 C17orf75Q9HAS0 396 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 ATP6V0A4Q9HBG4 840 aa17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 MAP3K20Q9NYL2 800 aaKnown RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 AGO2Q9UKV8 859 aaKnown RBP17.39■□□□□ 0.37
TM9SF1-201ENST00000261789 EDN1P05305 212 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 DPEP1P16444 411 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 NOMO3P69849 1222 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 SP2Q02086 613 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 IZUMO3Q5VZ72 239 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 GRK7Q8WTQ7 553 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 NAALADL1Q9UQQ1 740 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 TLR3O15455 904 aaKnown RBP17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 PSAPP07602 524 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 ETS1P14921 441 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 CUL2Q13617 745 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 MCPH1Q8NEM0 835 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 OR5B17Q8NGF7 314 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 ADAM33Q9BZ11 813 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 SLC9A2Q9UBY0 812 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 NUB1Q9Y5A7 615 aa17.38■□□□□ 0.37
TM9SF1-201ENST00000261789 LRRIQ4A6NIV6 560 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 ZC3H11AO75152 810 aaKnown RBP eCLIP17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 CLTAP09496 248 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 KCNA3P22001 575 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 PSMD6Q15008 389 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 P3H1Q32P28 736 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 CAPN12Q6ZSI9 719 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 RHOT1Q8IXI2 618 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 DHX37Q8IY37 1157 aaKnown RBP17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 GPATCH11Q8N954 259 aa17.37■□□□□ 0.37
TM9SF1-201ENST00000261789 GPRASP2Q96D09 838 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms