RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 CFAP99D6REC4 459 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 CIAO1O76071 339 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 LCA5LO95447 670 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 CTTNQ14247 550 aaKnown RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 SLC29A2Q14542 456 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 CHI3L2Q15782 390 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 UBE2SQ16763 222 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 MASTLQ96GX5 879 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 SERPINB12Q96P63 405 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 DDX20Q9UHI6 824 aaKnown RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 IPPQ9Y573 584 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 XDHP47989 1333 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 PDZK1P1A8MUH7 402 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 UBOX5O94941 541 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 MFN2O95140 757 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 CYP2E1P05181 493 aaPredicted RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 GCLMP48507 274 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 NUDT2P50583 147 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 ITGB3BPQ13352 177 aaPredicted RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 TTC39BQ5VTQ0 682 aaPredicted RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 ARHGAP17Q68EM7 881 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 TSHZ1Q6ZSZ6 1077 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 OSBP2Q969R2 916 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 E2F7Q96AV8 911 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 CEP170P1Q96L14 293 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 C1orf232A0A0U1RR37 186 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 GDF11O95390 407 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 CYBBP04839 570 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 PHKA1P46020 1223 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 KRT76Q01546 638 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 WASHC2DQ5SRD0 308 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 MTHFD1LQ6UB35 978 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 PRUNE1Q86TP1 453 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 SLC9A2Q9UBY0 812 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 PCSK1NQ9UHG2 260 aa11.27□□□□□ -0.61
SLC6A4-201ENST00000261707 ASMTLO95671 621 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 ANGPT1Q15389 498 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 SURF1Q15526 300 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 SLC18A3Q16572 532 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 GPATCH4Q5T3I0 446 aaKnown RBP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 KCTD1Q719H9 257 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 FAM129AQ9BZQ8 928 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 MYOM2P54296 1465 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 TRIP4Q15650 581 aaPredicted RBP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 ANO4Q32M45 955 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 RRM2BQ7LG56 351 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 PDCD6IPQ8WUM4 868 aaKnown RBP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 LRCH1Q9Y2L9 728 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 SERPINB9P50453 376 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 FXR1P51114 621 aaKnown RBP eCLIP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 OVGP1Q12889 678 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 RXFP1Q9HBX9 757 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 TOMM70O94826 608 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 BCL10O95999 233 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 CALB2P22676 271 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 SLC1A1P43005 524 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 OSTNP61366 133 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 CAPSLQ8WWF8 208 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 MCRS1Q96EZ8 462 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 AGPAT1Q99943 283 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 HSPBP1Q9NZL4 362 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 V9GYQ6 96 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 LOC102724428A0A0B4J2F2 783 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 USP17L8P0C7I0 530 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 PSMA4P25789 261 aaKnown RBP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 PTPN4P29074 926 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 MAGEA4P43358 317 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 SIK1P57059 783 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 PREPLQ4J6C6 727 aaPredicted RBP11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 TMEM270Q6UE05 265 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 RIN3Q8TB24 985 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 C19orf60Q96EN9 201 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 MSTO1Q9BUK6 570 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 TMEM161AQ9NX61 479 aa11.26□□□□□ -0.61
SLC6A4-201ENST00000261707 CLDN3O15551 220 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 RTN2O75298 545 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 SMNDC1O75940 238 aaKnown RBP eCLIP11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 MYL2P10916 166 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 IMPDH2P12268 514 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 CYFIP1Q7L576 1253 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 NLRP4Q96MN2 994 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 C17orf80Q9BSJ5 609 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 BHMT2Q9H2M3 363 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 CYLDQ9NQC7 956 aa11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 XPO7Q9UIA9 1087 aaKnown RBP11.25□□□□□ -0.61
SLC6A4-201ENST00000261707 UBXN8O00124 270 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms