RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 MTUS1Q9ULD2 1270 aa22.33■■□□□ 1.17
RTCA-201ENST00000260563 PRG3Q9Y2Y8 225 aaPredicted RBP22.33■■□□□ 1.17
RTCA-201ENST00000260563 NRP1O14786 923 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 ALDH2P05091 517 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 GALTP07902 379 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 TRIM49P0CI25 452 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 TRIM49CP0CI26 452 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 PPM1AP35813 382 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 CLCNKBP51801 687 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 GUCY2FP51841 1108 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 AP3M2P53677 418 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 DUOXA2Q1HG44 320 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 OR5B17Q8NGF7 314 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 PAAF1Q9BRP4 392 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 FAN1Q9Y2M0 1017 aa22.32■■□□□ 1.16
RTCA-201ENST00000260563 NT5C1B-RDH14C9J2C7 533 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 PODXLO00592 558 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 LRPAP1P30533 357 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 ERVK-21P61565 698 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 CLDN10P78369 228 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 CCDC173Q0VFZ6 552 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 PTPN21Q16825 1174 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 UPP1Q16831 310 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 SPRED2Q7Z698 418 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 VSTM4Q8IW00 320 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 DDX27Q96GQ7 796 aaKnown RBP22.31■■□□□ 1.16
RTCA-201ENST00000260563 PDLIM2Q96JY6 352 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 FAM84AQ96KN4 292 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 PLVAPQ9BX97 442 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 ITGA11Q9UKX5 1188 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 CDH23Q9H251 3354 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 SOX1O00570 391 aaPredicted RBP22.31■■□□□ 1.16
RTCA-201ENST00000260563 RPL9P32969 192 aaKnown RBP22.31■■□□□ 1.16
RTCA-201ENST00000260563 BMPR1AP36894 532 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 PBX1P40424 430 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 EPC2Q52LR7 807 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 DRC7Q8IY82 874 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 TMEM130Q8N3G9 435 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 C1orf127Q8N9H9 656 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 RABGGTAQ92696 567 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 COLEC11Q9BWP8 271 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 MMRN2Q9H8L6 949 aa22.31■■□□□ 1.16
RTCA-201ENST00000260563 ATG2AQ2TAZ0 1938 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 CHD9Q3L8U1 2897 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 TMEM265A0A087WTH1 108 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 A0A1W2PQC6 194 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 C5orf67F2Z3F1 127 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 STX10O60499 249 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 ITGB3P05106 788 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 C1orf220Q5T0J3 134 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 SLC39A11Q8N1S5 342 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 TMEM169Q96HH4 297 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 CERS4Q9HA82 394 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 MARCH5Q9NX47 278 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 SPG21Q9NZD8 308 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 R3HCC1Q9Y3T6 440 aaKnown RBP22.3■■□□□ 1.16
RTCA-201ENST00000260563 TSC2P49815 1807 aa22.3■■□□□ 1.16
RTCA-201ENST00000260563 KIF4AO95239 1232 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 KRT19P08727 400 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 POLR2BP30876 1174 aaKnown RBP22.29■■□□□ 1.16
RTCA-201ENST00000260563 FMO5P49326 533 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 BIRC3Q13489 604 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 HABP4Q5JVS0 413 aaKnown RBP22.29■■□□□ 1.16
RTCA-201ENST00000260563 C9orf57Q5W0N0 161 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 TRAPPC11Q7Z392 1133 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 TMEM173Q86WV6 379 aaPredicted RBP22.29■■□□□ 1.16
RTCA-201ENST00000260563 FBXO22Q8NEZ5 403 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 HASPINQ8TF76 798 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 ZNF516Q92618 1163 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 IGSF21Q96ID5 467 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 LRCH3Q96II8 777 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 ERGIC2Q96RQ1 377 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 C11orf84Q9BUA3 381 aaPredicted RBP22.29■■□□□ 1.16
RTCA-201ENST00000260563 VWA8A3KMH1 1905 aa22.29■■□□□ 1.16
RTCA-201ENST00000260563 TMEM189-UBE2V1I3L0A0 370 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 B3GAT3O94766 335 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 RB1P06400 928 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 GCLMP48507 274 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 PPP3CAQ08209 521 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 TDRD10Q5VZ19 366 aaKnown RBP22.28■■□□□ 1.16
RTCA-201ENST00000260563 SPECC1LQ69YQ0 1117 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 DCLRE1AQ6PJP8 1040 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 TMC6Q7Z403 805 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 KLHL23Q8NBE8 558 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 SPC24Q8NBT2 197 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 ARNTL2Q8WYA1 636 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 ZNF560Q96MR9 790 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 PPP1R9BQ96SB3 815 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 ZNF576Q9H609 170 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 TMEM8AQ9HCN3 771 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 ADAM28Q9UKQ2 775 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 CHD7Q9P2D1 2997 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 ITIH6Q6UXX5 1313 aa22.28■■□□□ 1.16
RTCA-201ENST00000260563 ANO9A1A5B4 782 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 F8W810 466 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 N4BP1O75113 896 aaKnown RBP22.27■■□□□ 1.16
RTCA-201ENST00000260563 PHACTR2O75167 634 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 FGF18O76093 207 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 GTF2H1P32780 548 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 MXI1P50539 228 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms