RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PSMC1P62191 440 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ADCY2Q08462 1091 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 TTLL4Q14679 1199 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 LONRF1Q17RB8 773 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 OR6B2Q6IFH4 312 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 USP37Q86T82 979 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 OR6J1Q8NGC5 347 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 LMO3Q8TAP4 145 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 HELQQ8TDG4 1101 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ATP8B4Q8TF62 1192 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 DNAJB3Q8WWF6 145 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ZIC5Q96T25 663 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 KLF6Q99612 283 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 DDX23Q9BUQ8 820 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 TUT1Q9H6E5 874 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 RPF1Q9H9Y2 349 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 GTF3C4Q9UKN8 822 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 PIN4Q9Y237 131 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 VCANP13611 3396 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 M0QYV0 167 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 GPR25O00155 361 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 PPP1R37O75864 691 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 KRT1P04264 644 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 TAS2R40P59535 323 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 TAF1CQ15572 869 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ACOT1Q86TX2 421 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 C18orf25Q96B23 403 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 IWS1Q96ST2 819 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 B3GNT5Q9BYG0 378 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 SEMA4AQ9H3S1 761 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ALG13Q9NP73 1137 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 CISHQ9NSE2 258 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ANKEF1Q9NU02 776 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 DMAC2Q9NW81 257 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 SNTG2Q9NY99 539 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 WDR91A4D1P6 747 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 GOLGA8RI6L899 631 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 TULP2O00295 520 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 NDUFAB1O14561 156 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 VNN1O95497 513 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 FECHP22830 423 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 JAM2P57087 298 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 MAGOHP61326 146 aaKnown RBP9.68□□□□□ -0.86
CKAP2-201ENST00000258607 CUL2Q13617 745 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 PPP2R5AQ15172 486 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 METTL7BQ6UX53 244 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 GPRC5AQ8NFJ5 357 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 TFAP2BQ92481 460 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 FMO2Q99518 471 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 TNNC2P02585 160 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 GPC3P51654 580 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 CACNB2Q08289 660 aaPredicted RBP9.68□□□□□ -0.86
CKAP2-201ENST00000258607 SNAPC2Q13487 334 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 BMT2Q1RMZ1 405 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 JADE1Q6IE81 842 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 DNAJC24Q6P3W2 148 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 TTC27Q6P3X3 843 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 EFCAB13Q8IY85 973 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 ZDHHC14Q8IZN3 488 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 RNF10Q8N5U6 811 aaKnown RBP9.68□□□□□ -0.86
CKAP2-201ENST00000258607 CCDC26Q8TAB7 109 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 NEK9Q8TD19 979 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 EPS8L3Q8TE67 593 aaKnown RBP9.68□□□□□ -0.86
CKAP2-201ENST00000258607 TAF1DQ9H5J8 278 aaPredicted RBP9.68□□□□□ -0.86
CKAP2-201ENST00000258607 RPTORQ8N122 1335 aa9.68□□□□□ -0.86
CKAP2-201ENST00000258607 AGPSO00116 658 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 SGK1O00141 431 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 EXTL3O43909 919 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 RARAP10276 462 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 LIG3P49916 1009 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 EPHB4P54760 987 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 KYNUQ16719 465 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 C15orf59Q2T9L4 293 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 C1orf228Q6PIY5 440 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 B3GNT9Q6UX72 402 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 ZNF365Q70YC5 407 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 ZNF606Q8WXB4 792 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 LPPQ93052 612 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 ZFP42Q96MM3 310 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 TWNKQ96RR1 684 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 GPR20Q99678 358 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 MRPL4Q9BYD3 311 aaKnown RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 NUDT5Q9UKK9 219 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 PNMA2Q9UL42 364 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 PCDHGC5Q9Y5F6 944 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 MEIS3P2A8K0S8 358 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 LACTBL1A8MY62 500 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 LGALS2P05162 132 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 LCP1P13796 627 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 HSD17B3P37058 310 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 ATXN1P54253 815 aaKnown RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 NCKAP1LP55160 1127 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 CALCOCO2Q13137 446 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 SLC29A2Q14542 456 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 TTMPQ5BVD1 217 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 TWF2Q6IBS0 349 aaKnown RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 CRELD2Q6UXH1 353 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms