RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PDIK1LQ8N165 341 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 LRRC43Q8N309 656 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 POU5F2Q8N7G0 328 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 MORC4Q8TE76 937 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 PYDC1Q8WXC3 89 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 CBWD1Q9BRT8 395 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 IMPG2Q9BZV3 1241 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 MTMR4Q9NYA4 1195 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 PCDHB4Q9Y5E5 795 aa13.03□□□□□ -0.32
USP30-201ENST00000257548 MRC1P22897 1456 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 TLR3O15455 904 aaKnown RBP13.02□□□□□ -0.32
USP30-201ENST00000257548 SUPT3HO75486 399 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 DESP17661 470 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 GAP43P17677 238 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 VCAM1P19320 739 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 SAT1P21673 171 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 GPATCH4Q5T3I0 446 aaKnown RBP13.02□□□□□ -0.32
USP30-201ENST00000257548 PPP1R18Q6NYC8 613 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.32
USP30-201ENST00000257548 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
USP30-201ENST00000257548 RTN3O95197 1032 aaPredicted RBP13.02□□□□□ -0.33
USP30-201ENST00000257548 ACADSP16219 412 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 BGNP21810 368 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 PSMC4P43686 418 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 NFIXQ14938 502 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 GALNT4Q8N4A0 578 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 ZNF513Q8N8E2 541 aaPredicted RBP13.02□□□□□ -0.33
USP30-201ENST00000257548 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 ZNF75CPQ92670 426 aaPredicted RBP13.02□□□□□ -0.33
USP30-201ENST00000257548 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 AGPAT3Q9NRZ7 376 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 USP54Q70EL1 1684 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 HNRNPRO43390 633 aaKnown RBP13.02□□□□□ -0.33
USP30-201ENST00000257548 FESP07332 822 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 HIF1AQ16665 826 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 SMTNL2Q2TAL5 461 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 IRGCQ6NXR0 463 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 PRPF39Q86UA1 669 aaKnown RBP13.02□□□□□ -0.33
USP30-201ENST00000257548 CNKSR1Q969H4 720 aa13.02□□□□□ -0.33
USP30-201ENST00000257548 ZNF184Q99676 751 aaPredicted RBP13.02□□□□□ -0.33
USP30-201ENST00000257548 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 STAMBPO95630 424 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 ARSHQ5FYA8 562 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 NXNQ6DKJ4 435 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 SCYL2Q6P3W7 929 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 LCA5Q86VQ0 697 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 NME8Q8N427 588 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP30-201ENST00000257548 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 TMEM121Q9BTD3 319 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 KIFC3Q9BVG8 833 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 APOL6Q9BWW8 343 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 TMEM120AQ9BXJ8 343 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 ARL8BQ9NVJ2 186 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 GALNT8Q9NY28 637 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 SAE1Q9UBE0 346 aaPredicted RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 GGA1Q9UJY5 639 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 PRKCIP41743 596 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 NPEPPSP55786 919 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 DSG1Q02413 1049 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 SLC1A5Q15758 541 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 ATP13A4Q4VNC1 1196 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 OTOAQ7RTW8 1153 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 RIBC1Q8N443 379 aaPredicted RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 TEKT1Q969V4 418 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 DNAJC1Q96KC8 554 aaKnown RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 H7C0C1 242 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 PDE5AO76074 875 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 ATP5OP48047 213 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 WDR4P57081 412 aaKnown RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 FASTKD3Q14CZ7 662 aaKnown RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 TMEM119Q4V9L6 283 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 TTC7BQ86TV6 843 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP30-201ENST00000257548 FAM81AQ8TBF8 368 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 BTBD10Q9BSF8 475 aa13.01□□□□□ -0.33
USP30-201ENST00000257548 R3HDM2Q9Y2K5 976 aaKnown RBP13.01□□□□□ -0.33
USP30-201ENST00000257548 NOP56O00567 594 aaKnown RBP13□□□□□ -0.33
USP30-201ENST00000257548 PSMG1O95456 288 aa13□□□□□ -0.33
USP30-201ENST00000257548 TFDP1Q14186 410 aa13□□□□□ -0.33
USP30-201ENST00000257548 RASA2Q15283 850 aa13□□□□□ -0.33
USP30-201ENST00000257548 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
USP30-201ENST00000257548 EMC10Q5UCC4 262 aa13□□□□□ -0.33
USP30-201ENST00000257548 FBXO33Q7Z6M2 555 aa13□□□□□ -0.33
USP30-201ENST00000257548 GALNT15Q8N3T1 639 aa13□□□□□ -0.33
USP30-201ENST00000257548 RFWD2Q8NHY2 731 aa13□□□□□ -0.33
USP30-201ENST00000257548 NYXQ9GZU5 481 aa13□□□□□ -0.33
USP30-201ENST00000257548 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
USP30-201ENST00000257548 SMG5Q9UPR3 1016 aaKnown RBP13□□□□□ -0.33
USP30-201ENST00000257548 ZNF142P52746 1687 aaPredicted RBP13□□□□□ -0.33
USP30-201ENST00000257548 BCL9O00512 1426 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms