RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 MTMR4Q9NYA4 1195 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 ADD3Q9UEY8 706 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 FBXO2Q9UK22 296 aaPredicted RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 GJD2Q9UKL4 321 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 CBLCQ9ULV8 474 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 APOBEC2Q9Y235 224 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 SF3B6Q9Y3B4 125 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 IPPQ9Y573 584 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 PTPDC1A2A3K4 754 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 CCDC66A2RUB6 948 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 GOLGA6L6A8MZA4 724 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 SEPT4O43236 478 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 GAS7O60861 476 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 H2AFYO75367 372 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 CNMDO75829 334 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 FBXO21O94952 628 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 TNFAIP3P21580 790 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 SMARCA1P28370 1054 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 HOXC13P31276 330 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 GUCY1A2P33402 732 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 GRIK1P39086 918 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 SEPHS1P49903 392 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 STAT2P52630 851 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 ZNF131P52739 623 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 POU4F1Q01851 419 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 IMMTQ16891 758 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 GJC2Q5T442 439 aaPredicted RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 MFSD4BQ5TF39 518 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 CWF19L1Q69YN2 538 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 CFAP161Q6P656 301 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 ZPBP2Q6X784 338 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 CENPQQ7L2Z9 268 aaPredicted RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 DDX53Q86TM3 631 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 CPNE8Q86YQ8 564 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 PASD1Q8IV76 773 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 SMAP1Q8IYB5 467 aaPredicted RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 ZNF713Q8N859 430 aaPredicted RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 U2AF1L4Q8WU68 220 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 LRGUKQ96M69 825 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 CCDC140Q96MF4 163 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 MMP19Q99542 508 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 P2RX7Q99572 595 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 KCNJ15Q99712 375 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 SLC12A9Q9BXP2 914 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 GLT8D2Q9H1C3 349 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 UPF3AQ9H1J1 476 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 ACAD9Q9H845 621 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 IPPKQ9H8X2 491 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 AP5S1Q9NUS5 200 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 ZNF69Q9UC07 566 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 DDX20Q9UHI6 824 aaKnown RBP4.1□□□□□ -1.75
RBM39-201ENST00000253363 RABL2BQ9UNT1 228 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 ST14Q9Y5Y6 855 aa4.1□□□□□ -1.75
RBM39-201ENST00000253363 ABCB11O95342 1321 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 SNX2O60749 519 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 STAM2O75886 525 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 FLOT1O75955 427 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 AGR2O95994 175 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 CALM1P0DP23 149 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 CALM2P0DP24 149 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 CALM3P0DP25 149 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 CYP2C8P10632 490 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 CYBAP13498 195 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 AKR1A1P14550 325 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 GLULP15104 373 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 AKR1B1P15121 316 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 ADMP35318 185 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 SARSP49591 514 aaKnown RBP4.09□□□□□ -1.75
RBM39-201ENST00000253363 GNAQP50148 359 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 NAP1L1P55209 391 aaKnown RBP4.09□□□□□ -1.75
RBM39-201ENST00000253363 SOX10P56693 466 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 HMGN5P82970 282 aaKnown RBP4.09□□□□□ -1.75
RBM39-201ENST00000253363 GHRHRQ02643 423 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 TRDNQ13061 729 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 SNX17Q15036 470 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 PPP2R5BQ15173 497 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 ANKRD45Q5TZF3 282 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 CREB3L3Q68CJ9 461 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 XRRA1Q6P2D8 792 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 KCNV1Q6PIU1 500 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 MAATS1Q7Z4T9 603 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 TCEAL8Q8IYN2 117 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 PCSK9Q8NBP7 692 aaKnown RBP4.09□□□□□ -1.75
RBM39-201ENST00000253363 FLCNQ8NFG4 579 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 EZH1Q92800 747 aaPredicted RBP4.09□□□□□ -1.75
RBM39-201ENST00000253363 UTP4Q969X6 686 aaKnown RBP4.09□□□□□ -1.75
RBM39-201ENST00000253363 PGBD4Q96DM1 585 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 TCTN2Q96GX1 697 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 FAM46AQ96IP4 442 aaKnown RBP4.09□□□□□ -1.75
RBM39-201ENST00000253363 MEGF10Q96KG7 1140 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 ARHGAP39Q9C0H5 1083 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 KCNF1Q9H3M0 494 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 R3HDMLQ9H3Y0 253 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 SLC38A10Q9HBR0 1119 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 ANLNQ9NQW6 1124 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 GPR27Q9NS67 375 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 MRGBPQ9NV56 204 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 RBPJLQ9UBG7 517 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 GTF2A1LQ9UNN4 478 aa4.09□□□□□ -1.75
RBM39-201ENST00000253363 CNPY2Q9Y2B0 182 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms