RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 TIGD1Q96MW7 591 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 CLSTN3Q9BQT9 956 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 S1PR5Q9H228 398 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.43■□□□□ 0.06
CNN1-201ENST00000252456 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.43■□□□□ 0.06
CNN1-201ENST00000252456 ADAM12O43184 909 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 XPOTO43592 962 aaKnown RBP15.43■□□□□ 0.06
CNN1-201ENST00000252456 ADH1AP07327 375 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 KLRC2P26717 231 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
CNN1-201ENST00000252456 PSMD5Q16401 504 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 RSPO2Q6UXX9 243 aaPredicted RBP15.43■□□□□ 0.06
CNN1-201ENST00000252456 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 CEP57Q86XR8 500 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 BEST2Q8NFU1 509 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 SPATA20Q8TB22 786 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 ERCC4Q92889 916 aaPredicted RBP15.43■□□□□ 0.06
CNN1-201ENST00000252456 NECAB3Q96P71 396 aaPredicted RBP15.43■□□□□ 0.06
CNN1-201ENST00000252456 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 CDH22Q9UJ99 828 aa15.43■□□□□ 0.06
CNN1-201ENST00000252456 PTPRJQ12913 1337 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 DENND4AQ7Z401 1863 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 PIRO00625 290 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 SPTLC1O15269 473 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 TRAPPC3O43617 180 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 SMAD2Q15796 467 aaKnown RBP15.42■□□□□ 0.06
CNN1-201ENST00000252456 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 SCARA3Q6AZY7 606 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 LILRA6Q6PI73 481 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 PPFIBP1Q86W92 1011 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 NT5DC4Q86YG4 428 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 CXorf38Q8TB03 319 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 SUSD6Q92537 303 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 GZF1Q9H116 711 aaPredicted RBP15.42■□□□□ 0.06
CNN1-201ENST00000252456 CGNQ9P2M7 1197 aaKnown RBP15.42■□□□□ 0.06
CNN1-201ENST00000252456 MTRRQ9UBK8 725 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 NUB1Q9Y5A7 615 aa15.42■□□□□ 0.06
CNN1-201ENST00000252456 M0QZQ0 153 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 SYN3O14994 580 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 SRGAP2BP0DMP2 458 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
CNN1-201ENST00000252456 MCM4P33991 863 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 CYP2J2P51589 502 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 SNRNP35Q16560 246 aaKnown RBP15.41■□□□□ 0.06
CNN1-201ENST00000252456 PUS10Q3MIT2 529 aaKnown RBP15.41■□□□□ 0.06
CNN1-201ENST00000252456 VARS2Q5ST30 1063 aaKnown RBP15.41■□□□□ 0.06
CNN1-201ENST00000252456 CLEC17AQ6ZS10 378 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 GLYCTKQ8IVS8 523 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 NOC3LQ8WTT2 800 aaKnown RBP15.41■□□□□ 0.06
CNN1-201ENST00000252456 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 DPP3Q9NY33 737 aa15.41■□□□□ 0.06
CNN1-201ENST00000252456 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
CNN1-201ENST00000252456 ZNF233A6NK53 670 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 PDXKO00764 312 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 TGM5O43548 720 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 TBC1D4O60343 1298 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 GLUD1P00367 558 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 LILRA4P59901 499 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 CREMQ03060 361 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 MRPL58Q14197 206 aaKnown RBP15.4■□□□□ 0.06
CNN1-201ENST00000252456 PALB2Q86YC2 1186 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 ELOA2Q8IYF1 753 aaPredicted RBP15.4■□□□□ 0.06
CNN1-201ENST00000252456 SMYD4Q8IYR2 804 aaPredicted RBP15.4■□□□□ 0.06
CNN1-201ENST00000252456 C12orf76Q8N812 135 aaPredicted RBP15.4■□□□□ 0.06
CNN1-201ENST00000252456 C1orf127Q8N9H9 656 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 XXYLT1Q8NBI6 393 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 CCDC34Q96HJ3 373 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 APOL5Q9BWW9 433 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 KIAA1586Q9HCI6 787 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 DZANK1Q9NVP4 752 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 DMAC2Q9NW81 257 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 MAPK8IP1Q9UQF2 711 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 PCDHA5Q9Y5H7 936 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 BACE2Q9Y5Z0 518 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 TRIOO75962 3097 aa15.4■□□□□ 0.06
CNN1-201ENST00000252456 C1RP00736 705 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 TFAMQ00059 246 aaKnown RBP15.39■□□□□ 0.05
CNN1-201ENST00000252456 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
CNN1-201ENST00000252456 PDXDC1Q6P996 788 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 SLC9A9Q8IVB4 645 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 GUF1Q8N442 669 aaKnown RBP15.39■□□□□ 0.05
CNN1-201ENST00000252456 RDH13Q8NBN7 331 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 GOLGA5Q8TBA6 731 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
CNN1-201ENST00000252456 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 MTMR12Q9C0I1 747 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 MAN1C1Q9NR34 630 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 PCDHB8Q9UN66 801 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 TRAF3IP3Q9Y228 551 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 KINO60870 393 aaKnown RBP15.39■□□□□ 0.05
CNN1-201ENST00000252456 PAPLNO95428 1278 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 SPATA31D3P0C874 917 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 UBE2HP62256 183 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 CYP24A1Q07973 514 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 RAB33AQ14088 237 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 ZCWPW2Q504Y3 356 aa15.39■□□□□ 0.05
CNN1-201ENST00000252456 SLC8B1Q6J4K2 584 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms