RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PLEKHA4Q9H4M7 779 aa26.39■■□□□ 1.82
SDF2L1-201ENST00000248958 SFXN1Q9H9B4 322 aa26.39■■□□□ 1.82
SDF2L1-201ENST00000248958 USP15Q9Y4E8 981 aaPredicted RBP26.39■■□□□ 1.82
SDF2L1-201ENST00000248958 BACE2Q9Y5Z0 518 aa26.39■■□□□ 1.82
SDF2L1-201ENST00000248958 SPDYE4A6NLX3 237 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 TGFB1I1O43294 461 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 RHOBTB3O94955 611 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 IGFBP6P24592 240 aaPredicted RBP26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 TKTP29401 623 aaKnown RBP26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 DPYDQ12882 1025 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 STK4Q13043 487 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 KCNB1Q14721 858 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 SURF1Q15526 300 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 APPL2Q8NEU8 664 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 GOLGA5Q8TBA6 731 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 CACTINQ8WUQ7 758 aaKnown RBP26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 SUSD6Q92537 303 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 AGPAT3Q9NRZ7 376 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 HSPBP1Q9NZL4 362 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 MTRRQ9UBK8 725 aa26.38■■□□□ 1.81
SDF2L1-201ENST00000248958 TTC28Q96AY4 2481 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 ZNF233A6NK53 670 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 FAM160A1Q05DH4 1040 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 ADHFE1Q8IWW8 467 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 C12orf56Q8IXR9 622 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 KIAA0895Q8NCT3 520 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 TIGD1Q96MW7 591 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 NECTIN4Q96NY8 510 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 CLSTN3Q9BQT9 956 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 MUC3AQ02505 3323 aa26.37■■□□□ 1.81
SDF2L1-201ENST00000248958 ARHGEF37A1IGU5 675 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 GOLGA8IPA6NC78 632 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 GOLGA8JA6NMD2 632 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 H7C4K7 107 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 I3L4J1 428 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 TNFRSF10AO00220 468 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 PRR29P0C7W0 189 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 MTHFRP42898 656 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 AARSP49588 968 aaKnown RBP eCLIP26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 SNW1Q13573 536 aaKnown RBP26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 C9orf57Q5W0N0 161 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 LILRA6Q6PI73 481 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 PALB2Q86YC2 1186 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 ENGASEQ8NFI3 743 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 CMASQ8NFW8 434 aaPredicted RBP26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 NOC3LQ8WTT2 800 aaKnown RBP26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 RIPOR3Q96MK2 946 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 MAN1C1Q9NR34 630 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 DPP3Q9NY33 737 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 HOOK1Q9UJC3 728 aaKnown RBP26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 PCDHB8Q9UN66 801 aa26.36■■□□□ 1.81
SDF2L1-201ENST00000248958 ANO9A1A5B4 782 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 M0QZQ0 153 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 PIRO00625 290 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 TGM5O43548 720 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 RPL17P18621 184 aaKnown RBP26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 CBX2Q14781 532 aaPredicted RBP26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 VARS2Q5ST30 1063 aaKnown RBP26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 CYP26C1Q6V0L0 522 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 GLYCTKQ8IVS8 523 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 EFCAB13Q8IY85 973 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 XXYLT1Q8NBI6 393 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 ZSWIM2Q8NEG5 633 aa26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 NECAB3Q96P71 396 aaPredicted RBP26.35■■□□□ 1.81
SDF2L1-201ENST00000248958 GUCY2FP51841 1108 aa26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 RAB33AQ14088 237 aa26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 MRPL58Q14197 206 aaKnown RBP26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 ATAT1Q5SQI0 421 aa26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 RARS2Q5T160 578 aaKnown RBP26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 DSTYKQ6XUX3 929 aa26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 C15orf39Q6ZRI6 1047 aa26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 APOL5Q9BWW9 433 aa26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 PHF7Q9BWX1 381 aaPredicted RBP26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 OXCT2Q9BYC2 517 aaPredicted RBP26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 RHOBTB2Q9BYZ6 727 aa26.34■■□□□ 1.81
SDF2L1-201ENST00000248958 CLIC2O15247 247 aa26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 LILRA4P59901 499 aa26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 ZP2Q05996 745 aa26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 ELOA2Q8IYF1 753 aaPredicted RBP26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 KREMEN2Q8NCW0 462 aa26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 TMEM174Q8WUU8 243 aa26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 RMND1Q9NWS8 449 aa26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 ZDHHC7Q9NXF8 308 aa26.33■■□□□ 1.81
SDF2L1-201ENST00000248958 C19orf67A6NJJ6 358 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 PDXKO00764 312 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 OR1D2P34982 312 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 PNPLA4P41247 253 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 TFAMQ00059 246 aaKnown RBP26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 SLC8B1Q6J4K2 584 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 ZNF280DQ6N043 979 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 RTL10Q7L3V2 364 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 GPR149Q86SP6 731 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 GJD3Q8N144 294 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 C12orf76Q8N812 135 aaPredicted RBP26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 ZNF560Q96MR9 790 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 PDE11AQ9HCR9 933 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 FBXW11Q9UKB1 542 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 CDY1Q9Y6F8 540 aa26.32■■□□□ 1.8
SDF2L1-201ENST00000248958 PAPLNO95428 1278 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 TYMPP19971 482 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms