RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ROPN1Q9HAT0 212 aaPredicted RBP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 DNAJC17Q9NVM6 304 aaKnown RBP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 GGA3Q9NZ52 723 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 R3HDM2Q9Y2K5 976 aaKnown RBP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 C4BPAP04003 597 aaKnown RBP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 SSTR3P32745 418 aaPredicted RBP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 MAP2K2P36507 400 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 IFNAR2P48551 515 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ITGA8P53708 1063 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ACTR2P61160 394 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 SF3A3Q12874 501 aaKnown RBP eCLIP15.32■□□□□ 0.04
HIF3A-202ENST00000244303 MON1BQ7L1V2 547 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CCDC125Q86Z20 511 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 PASD1Q8IV76 773 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 GPRC5DQ9NZD1 345 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 UMODL1Q5DID0 1318 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 LCTP09848 1927 aa15.32■□□□□ 0.04
HIF3A-202ENST00000244303 ASAP2O43150 1006 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 RASSF9O75901 435 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 PROSCO94903 275 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 VNN1O95497 513 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 MAN1A1P33908 653 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 SCTRP47872 440 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 CNGA2Q16280 664 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 LACTB2Q53H82 288 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-202ENST00000244303 ABHD15Q6UXT9 468 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 GRK7Q8WTQ7 553 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 C11orf70Q9BRQ4 267 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 HEMGNQ9BXL5 484 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 HAPLN2Q9GZV7 340 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 CCDC134Q9H6E4 229 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 KIAA1586Q9HCI6 787 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 SLC40A1Q9NP59 571 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 AGO2Q9UKV8 859 aaKnown RBP15.31■□□□□ 0.04
HIF3A-202ENST00000244303 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 RALAP11233 206 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 RDXP35241 583 aaKnown RBP15.31■□□□□ 0.04
HIF3A-202ENST00000244303 VPS41P49754 854 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 HIRAP54198 1017 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-202ENST00000244303 BPIFB4P59827 614 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 EMC2Q15006 297 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 SYDE1Q6ZW31 735 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-202ENST00000244303 PIGWQ7Z7B1 504 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 FAM118BQ9BPY3 351 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 CYP39A1Q9NYL5 469 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 NFASCO94856 1347 aa15.31■□□□□ 0.04
HIF3A-202ENST00000244303 H0YCG3 227 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 GAS8O95995 478 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 VIMP08670 466 aaKnown RBP15.3■□□□□ 0.04
HIF3A-202ENST00000244303 ATF2P15336 505 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 ACO1P21399 889 aaKnown RBP15.3■□□□□ 0.04
HIF3A-202ENST00000244303 TAS2R40P59535 323 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 STRN3Q13033 797 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 KLF1Q13351 362 aaPredicted RBP15.3■□□□□ 0.04
HIF3A-202ENST00000244303 CRELD2Q6UXH1 353 aaPredicted RBP15.3■□□□□ 0.04
HIF3A-202ENST00000244303 ANKS4BQ8N8V4 417 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 NLGN2Q8NFZ4 835 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 P3H4Q92791 437 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 TMEM143Q96AN5 459 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
HIF3A-202ENST00000244303 PWWP2AQ96N64 755 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 TEX13BQ9BXU2 312 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 KDM4CQ9H3R0 1056 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 APOBEC3GQ9HC16 384 aaKnown RBP15.3■□□□□ 0.04
HIF3A-202ENST00000244303 A1CFQ9NQ94 594 aaKnown RBP15.3■□□□□ 0.04
HIF3A-202ENST00000244303 KLC4Q9NSK0 619 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 CTNNAL1Q9UBT7 734 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 AFG3L2Q9Y4W6 797 aa15.3■□□□□ 0.04
HIF3A-202ENST00000244303 TTC4O95801 387 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 CREB1P16220 341 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ADCY8P40145 1251 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 POLGP54098 1239 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-202ENST00000244303 NOMO3P69849 1222 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 CUL2Q13617 745 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 PRKG1Q13976 671 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 KYNUQ16719 465 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 NOL9Q5SY16 702 aaKnown RBP15.29■□□□□ 0.04
HIF3A-202ENST00000244303 TMEM270Q6UE05 265 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ATL2Q8NHH9 583 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ARHGEF2Q92974 986 aaKnown RBP15.29■□□□□ 0.04
HIF3A-202ENST00000244303 SERPINB12Q96P63 405 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ELAC2Q9BQ52 826 aaKnown RBP15.29■□□□□ 0.04
HIF3A-202ENST00000244303 TRAIPQ9BWF2 469 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ACAD9Q9H845 621 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ADAM22Q9P0K1 906 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 PCDHB4Q9Y5E5 795 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 CCT8L1PA6NM43 557 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 GNA15P30679 374 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 GJC1P36383 396 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 PTP4A2Q12974 167 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 LRRC14Q15048 493 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 XKR3Q5GH77 459 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 LIN9Q5TKA1 542 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 RHOT1Q8IXI2 618 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 MGARPQ8TDB4 240 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 SCLT1Q96NL6 688 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 HAUS2Q9NVX0 235 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms