RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 MARCOQ9UEW3 520 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 TTLL13PA6NNM8 815 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 FAM25AB3EWG3 89 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 FAM25CB3EWG5 89 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 FAM25GB3EWG6 89 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 AP3B1O00203 1094 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 CHEK2O96017 543 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 KRT1P04264 644 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 BMP6P22004 513 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 DLG4P78352 724 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 TRAF2Q12933 501 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 GLYCTKQ8IVS8 523 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 ZNF564Q8TBZ8 553 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 SCYL1Q96KG9 808 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 DHX36Q9H2U1 1008 aaKnown RBP13.53□□□□□ -0.24
VAMP4-201ENST00000236192 SEL1LQ9UBV2 794 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
VAMP4-201ENST00000236192 TM9SF1O15321 606 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 GSC2O15499 205 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 ATP5BP06576 529 aaKnown RBP13.52□□□□□ -0.24
VAMP4-201ENST00000236192 C1QTNF12Q5T7M4 302 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 WDR59Q6PJI9 974 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.24
VAMP4-201ENST00000236192 E2F7Q96AV8 911 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 OLFM1Q99784 485 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 CORO1BQ9BR76 489 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 NEU2Q9Y3R4 380 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 GPR75-ASB3A0A0A6YYF3 556 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 MAP3K13O43283 966 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 AKAP10O43572 662 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 ARID3BQ8IVW6 561 aaPredicted RBP13.52□□□□□ -0.24
VAMP4-201ENST00000236192 ENDOVQ8N8Q3 282 aaKnown RBP13.52□□□□□ -0.24
VAMP4-201ENST00000236192 RDH13Q8NBN7 331 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 ASB3Q9Y575 518 aa13.52□□□□□ -0.24
VAMP4-201ENST00000236192 ABCB11O95342 1321 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 A0A087X0T9 212 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 HTR3EA5X5Y0 456 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 FAM228BP0C875 321 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 GEMIN4P57678 1058 aaKnown RBP13.52□□□□□ -0.25
VAMP4-201ENST00000236192 GPS1Q13098 491 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 SLC39A6Q13433 755 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 ESCO1Q5FWF5 840 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 DEPDC1BQ8WUY9 529 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 HPS5Q9UPZ3 1129 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 STARD3NLO95772 234 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 OXCT1P55809 520 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 PTK2Q05397 1052 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 ZFP1Q6P2D0 407 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 AKAP14Q86UN6 197 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 EXOC3L1Q86VI1 746 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 PPM1KQ8N3J5 372 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 MXD3Q9BW11 206 aa13.52□□□□□ -0.25
VAMP4-201ENST00000236192 ADCY10Q96PN6 1610 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 DCDC2CA8MYV0 355 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 CAMTA2O94983 1202 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 TBC1D10CQ8IV04 446 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 ZNF75CPQ92670 426 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-201ENST00000236192 GJA10Q969M2 543 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 HEMGNQ9BXL5 484 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 MCM9Q9NXL9 1143 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-201ENST00000236192 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 PXDNLA1KZ92 1463 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 A0A0A6YYK5 440 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-201ENST00000236192 CPA3P15088 417 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 CDH24Q86UP0 819 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 UBE2TQ9NPD8 197 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-201ENST00000236192 UVRAGQ9P2Y5 699 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 PCDHA12Q9UN75 941 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 SALL1Q9NSC2 1324 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 GOLGA8SH3BPF8 625 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 GOLGA8MH3BSY2 632 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 RGL2O15211 777 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 ADD2P35612 726 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 SOX5P35711 763 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 INPP5AQ14642 412 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 SLC13A1Q9BZW2 595 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 COPG2Q9UBF2 871 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 C2CD2LO14523 706 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 GAS7O60861 476 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 SPAG6O75602 509 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 ALADP13716 330 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 VCLP18206 1134 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
VAMP4-201ENST00000236192 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
VAMP4-201ENST00000236192 WASHC5Q12768 1159 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 HIF1AQ16665 826 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 SAMD3Q8N6K7 520 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 TBC1D16Q8TBP0 767 aa13.51□□□□□ -0.25
VAMP4-201ENST00000236192 MRPL47Q9HD33 250 aaKnown RBP13.51□□□□□ -0.25
VAMP4-201ENST00000236192 F8W031 263 aaPredicted RBP13.5□□□□□ -0.25
VAMP4-201ENST00000236192 AIM2O14862 343 aa13.5□□□□□ -0.25
VAMP4-201ENST00000236192 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms