RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 TADA2AO75478 443 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 HMBSP08397 361 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 ITIH2P19823 946 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 FMO5P49326 533 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 STX3Q13277 289 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 AARS2Q5JTZ9 985 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 AGPAT5Q9NUQ2 364 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 PSMC3IPQ9P2W1 217 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 ZBTB7AO95365 584 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 HSPA1AP0DMV8 641 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 HSPA1BP0DMV9 641 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 BYSLQ13895 437 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 USP10Q14694 798 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 FOPNLQ96NB1 174 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 C7orf25Q9BPX7 421 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 LSM7Q9UK45 103 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 CHD1O14646 1710 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 SRGNP10124 158 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 CYP2C19P33261 490 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 SERPINB10P48595 397 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 CDC42EP1Q00587 391 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 WASHC5Q12768 1159 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 SGSM1Q2NKQ1 1148 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 LRIG3Q6UXM1 1119 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 LONP2Q86WA8 852 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 ELP3Q9H9T3 547 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 EHD2Q9NZN4 543 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 GALCP54803 685 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 RABGAP1LQ5R372 815 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 CCSER1Q9C0I3 900 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 NEU2Q9Y3R4 380 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 CCDC78A2IDD5 438 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 H0Y626 953 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 NDUFS3O75489 264 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 TRIM16O95361 564 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 AKT1P31749 480 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 SERPINB9P50453 376 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 CLEC17AQ6ZS10 378 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-201ENST00000230538 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 TMEM161AQ9NX61 479 aa12.12□□□□□ -0.47
LAMA4-201ENST00000230538 APOA1P02647 267 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 MYL2P10916 166 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ST8SIA6P61647 398 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 PCMTD2Q9NV79 361 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 OR2W6PQ8NHA6 318 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 NSUN4Q96CB9 384 aaKnown RBP12.11□□□□□ -0.47
LAMA4-201ENST00000230538 MUC3BQ9H195 1237 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
LAMA4-201ENST00000230538 AKAP10O43572 662 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 KRT8P05787 483 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ENO3P13929 434 aaPredicted RBP12.11□□□□□ -0.47
LAMA4-201ENST00000230538 LAMB3Q13751 1172 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 NR1I3Q14994 352 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 UGP2Q16851 508 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 IL31Q6EBC2 164 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 C16orf89Q6UX73 402 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ZNF229Q9UJW7 825 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ITIH6Q6UXX5 1313 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ABCA6Q8N139 1617 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 RASSF10A6NK89 507 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 PDGFRBP09619 1106 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 PPP3CCP48454 512 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 DNAL1Q4LDG9 190 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ADCK2Q7Z695 626 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 A2ML1A8K2U0 1454 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 SRP72O76094 671 aaKnown RBP12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ZNF543Q08ER8 600 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 COG2Q14746 738 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 SNX17Q15036 470 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 PCSK7Q16549 785 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 FAM118BQ9BPY3 351 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 YIPF2Q9BWQ6 316 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 FAM32AQ9Y421 112 aaKnown RBP12.11□□□□□ -0.47
LAMA4-201ENST00000230538 hCG_2014768A0A024R1R8 64 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
LAMA4-201ENST00000230538 TBC1D4O60343 1298 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 IRF1P10914 325 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 UCHL3P15374 230 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 LRRC74AQ0VAA2 488 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 KATNAL1Q9BW62 490 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 CDYLQ9Y232 598 aa12.11□□□□□ -0.47
LAMA4-201ENST00000230538 MYO1GB0I1T2 1018 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms