RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 POMGNT1Q8WZA1 660 aa15.46■□□□□ 0.06
GPN3-201ENST00000228827 DHX58Q96C10 678 aa15.46■□□□□ 0.06
GPN3-201ENST00000228827 HVCN1Q96D96 273 aa15.46■□□□□ 0.06
GPN3-201ENST00000228827 ACCSQ96QU6 501 aa15.46■□□□□ 0.06
GPN3-201ENST00000228827 STRA6Q9BX79 667 aa15.46■□□□□ 0.06
GPN3-201ENST00000228827 FGFBP2Q9BYJ0 223 aa15.46■□□□□ 0.06
GPN3-201ENST00000228827 PCDHB8Q9UN66 801 aa15.46■□□□□ 0.06
GPN3-201ENST00000228827 WDR27A2RRH5 827 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 PPEF2O14830 753 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 TBC1D4O60343 1298 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 CUTAO60888 179 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 ADRB2P07550 413 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 ELF1P32519 619 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 TDGQ13569 410 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 MRPL58Q14197 206 aaKnown RBP15.45■□□□□ 0.06
GPN3-201ENST00000228827 TMEM132DQ14C87 1099 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 SLC8B1Q6J4K2 584 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 ZNF280DQ6N043 979 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 SHC4Q6S5L8 630 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 DSTYKQ6XUX3 929 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 BEST2Q8NFU1 509 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 HCFC1R1Q9NWW0 138 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 FBXL5Q9UKA1 691 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 EXOC7Q9UPT5 735 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 STYXL1Q9Y6J8 313 aa15.45■□□□□ 0.06
GPN3-201ENST00000228827 FRMD3A2A2Y4 597 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 NARSO43776 548 aaKnown RBP15.44■□□□□ 0.06
GPN3-201ENST00000228827 ADSSP30520 456 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 HOXA9P31269 272 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 VCPP55072 806 aaKnown RBP15.44■□□□□ 0.06
GPN3-201ENST00000228827 E2F4Q16254 413 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 IER5LQ5T953 404 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 SPATA1Q5VX52 437 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 CD302Q8IX05 232 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 SYCP3Q8IZU3 236 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 ZNF461Q8TAF7 563 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 CYP4F11Q9HBI6 524 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 OLFML3Q9NRN5 406 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 EPS15L1Q9UBC2 864 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 ARIH1Q9Y4X5 557 aaPredicted RBP15.44■□□□□ 0.06
GPN3-201ENST00000228827 PCDHB13Q9Y5F0 798 aa15.44■□□□□ 0.06
GPN3-201ENST00000228827 M0QZQ0 153 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 PRRG1O14668 218 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 TRIOO75962 3097 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 PRPF6O94906 941 aaKnown RBP15.43■□□□□ 0.06
GPN3-201ENST00000228827 ABLIM3O94929 683 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 LAMP2P13473 410 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 PDIA4P13667 645 aaKnown RBP15.43■□□□□ 0.06
GPN3-201ENST00000228827 CPB1P15086 417 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 ME1P48163 572 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 CRELD2Q6UXH1 353 aaPredicted RBP15.43■□□□□ 0.06
GPN3-201ENST00000228827 DENND4AQ7Z401 1863 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 CCDC65Q8IXS2 484 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 ZSWIM2Q8NEG5 633 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 ITFG1Q8TB96 612 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 KCNG4Q8TDN1 519 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 NOC3LQ8WTT2 800 aaKnown RBP15.43■□□□□ 0.06
GPN3-201ENST00000228827 HPS3Q969F9 1004 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 SAAL1Q96ER3 474 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 TSPAN18Q96SJ8 248 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 FAM213AQ9BRX8 229 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 TNMDQ9H2S6 317 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.43■□□□□ 0.06
GPN3-201ENST00000228827 IGSF9Q9P2J2 1179 aa15.43■□□□□ 0.06
GPN3-201ENST00000228827 DNMT3BQ9UBC3 853 aaKnown RBP15.43■□□□□ 0.06
GPN3-201ENST00000228827 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.43■□□□□ 0.06
GPN3-201ENST00000228827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.42■□□□□ 0.06
GPN3-201ENST00000228827 SEC24AO95486 1093 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 LRG1P02750 347 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 OR4Q2P0C623 313 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 ASIC1P78348 528 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 YWHAHQ04917 246 aaPredicted RBP15.42■□□□□ 0.06
GPN3-201ENST00000228827 DNM1Q05193 864 aaKnown RBP15.42■□□□□ 0.06
GPN3-201ENST00000228827 POSTNQ15063 836 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 PABPC1LQ4VXU2 614 aaKnown RBP15.42■□□□□ 0.06
GPN3-201ENST00000228827 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 USP37Q86T82 979 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 IQUBQ8NA54 791 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 GLIS3Q8NEA6 775 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 TRIM9Q9C026 710 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 LRRC27Q9C0I9 530 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 MFSD1Q9H3U5 465 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 ASB7Q9H672 318 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 FBXL21Q9UKT6 434 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 CDH7Q9ULB5 785 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 PCDHA7Q9UN72 937 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 DUSP12Q9UNI6 340 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 DERAQ9Y315 318 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 VWA8A3KMH1 1905 aa15.42■□□□□ 0.06
GPN3-201ENST00000228827 MYH11P35749 1972 aa15.41■□□□□ 0.06
GPN3-201ENST00000228827 C2orf16Q68DN1 1984 aa15.41■□□□□ 0.06
GPN3-201ENST00000228827 GOLGA8IPA6NC78 632 aa15.41■□□□□ 0.06
GPN3-201ENST00000228827 GOLGA8JA6NMD2 632 aa15.41■□□□□ 0.06
GPN3-201ENST00000228827 SPTLC1O15269 473 aa15.41■□□□□ 0.06
GPN3-201ENST00000228827 POLR2DO15514 142 aaKnown RBP15.41■□□□□ 0.06
GPN3-201ENST00000228827 ATF2P15336 505 aa15.41■□□□□ 0.06
GPN3-201ENST00000228827 AVPR2P30518 371 aa15.41■□□□□ 0.06
GPN3-201ENST00000228827 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms