RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 PEX19P40855 299 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 MSH2P43246 934 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 HADHBP55084 474 aaKnown RBP11.86□□□□□ -0.51
NEFM-201ENST00000221166 TAS2R40P59535 323 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 CAV1Q03135 178 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 TMEM143Q96AN5 459 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 C10orf88Q9H8K7 445 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 MRPL47Q9HD33 250 aaKnown RBP11.86□□□□□ -0.51
NEFM-201ENST00000221166 AAASQ9NRG9 546 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
NEFM-201ENST00000221166 POLGP54098 1239 aaPredicted RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 PDIA2Q13087 525 aaKnown RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 STAT4Q14765 748 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 CCDC6Q16204 474 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 DEPTORQ8TB45 409 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 CD101Q93033 1021 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 TRIM11Q96F44 468 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 CAP2P40123 477 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 SPARCL1Q14515 664 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 SCARA5Q6ZMJ2 495 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 ZBTB33Q86T24 672 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 TMEM161BQ8NDZ6 487 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 SYTL5Q8TDW5 730 aaPredicted RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 FAM151AQ8WW52 585 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 ZWILCHQ9H900 591 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 SLCO1B3Q9NPD5 702 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 IKBKGQ9Y6K9 419 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 ASTN2O75129 1339 aaPredicted RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 ICAM1P05362 532 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 ASNSP08243 561 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 MRPS9P82933 396 aaKnown RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 PTK6Q13882 451 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 BAATQ14032 418 aaPredicted RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 SIX1Q15475 284 aaPredicted RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 TAF11Q15544 211 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 CYP1B1Q16678 543 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 MFSD5Q6N075 450 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 KRT27Q7Z3Y8 459 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 PSPC1Q8WXF1 523 aaKnown RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 FAM81BQ96LP2 452 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 RAB3IPQ96QF0 476 aaPredicted RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 POLR3FQ9H1D9 316 aaPredicted RBP11.85□□□□□ -0.51
NEFM-201ENST00000221166 SLC12A4Q9UP95 1085 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 PCDHA10Q9Y5I2 948 aa11.85□□□□□ -0.51
NEFM-201ENST00000221166 MYH11P35749 1972 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 PROSCO94903 275 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 CFHP08603 1231 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 CETPP11597 493 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 SLC1A1P43005 524 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 BBS9Q3SYG4 887 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 ERICH1Q86X53 443 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 TMEM109Q9BVC6 243 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 ATP6V0A4Q9HBG4 840 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 ZNF277Q9NRM2 450 aaPredicted RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 MAPK13O15264 365 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 BANF1O75531 89 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 GPC3P51654 580 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 JAK3P52333 1124 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 SPP2Q13103 211 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 PKN2Q16513 984 aaKnown RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 DNAJC24Q6P3W2 148 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 PALM2Q8IXS6 379 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 ZBTB45Q96K62 511 aaPredicted RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 RXFP1Q9HBX9 757 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 TXLNGQ9NUQ3 528 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 AGO2Q9UKV8 859 aaKnown RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 DNPEPQ9ULA0 475 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 PSMC4P43686 418 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 KRT76Q01546 638 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 SYDE1Q6ZW31 735 aaPredicted RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 CCHCR1Q8TD31 782 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 ATP6V0A1Q93050 837 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
NEFM-201ENST00000221166 MAGEB18Q96M61 343 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
NEFM-201ENST00000221166 KLRG2A4D1S0 409 aaPredicted RBP11.83□□□□□ -0.51
NEFM-201ENST00000221166 PAX7P23759 505 aa11.83□□□□□ -0.51
NEFM-201ENST00000221166 OVGP1Q12889 678 aa11.83□□□□□ -0.51
NEFM-201ENST00000221166 NFX1Q12986 1120 aaKnown RBP11.83□□□□□ -0.51
NEFM-201ENST00000221166 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.51
NEFM-201ENST00000221166 FYB2Q5VWT5 728 aa11.83□□□□□ -0.51
NEFM-201ENST00000221166 RBBP8NLQ8NC74 664 aaPredicted RBP11.83□□□□□ -0.51
NEFM-201ENST00000221166 SUPT20HQ8NEM7 779 aa11.83□□□□□ -0.51
NEFM-201ENST00000221166 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.51
NEFM-201ENST00000221166 MSTO1Q9BUK6 570 aa11.83□□□□□ -0.51
NEFM-201ENST00000221166 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.83□□□□□ -0.51
NEFM-201ENST00000221166 MROH7Q68CQ1 1323 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms