RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 COL4A3BPQ9Y5P4 624 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 FADS3Q9Y5Q0 445 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 PIK3CDO00329 1044 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 PJA2O43164 708 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 AGTP01019 485 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 MAGEA1P43355 309 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 SERPINB8P50452 374 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 PDCD4Q53EL6 469 aaKnown RBP14.44□□□□□ -0.1
GABPB1-201ENST00000220429 PACS1Q6VY07 963 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 INTS8Q75QN2 995 aaKnown RBP14.44□□□□□ -0.1
GABPB1-201ENST00000220429 CCDC84Q86UT8 332 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-201ENST00000220429 ECHDC2Q86YB7 292 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 LARGE2Q8N3Y3 721 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 FAM20AQ96MK3 541 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 KCTD10Q9H3F6 313 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 CLIC5Q9NZA1 410 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 VAV3Q9UKW4 847 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 N6AMT1Q9Y5N5 214 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 PITPNM2Q9BZ72 1349 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 SMIM31A0A1B0GVY4 71 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 SERPINB7O75635 380 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 PDE5AO76074 875 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 LCA5LO95447 670 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 CYP3A4P08684 503 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 CAMK2BQ13554 666 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 RTKN2Q8IZC4 609 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 GAB3Q8WWW8 586 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 MYLK2Q9H1R3 596 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 TIMM22Q9Y584 194 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 ATAD5Q96QE3 1844 aa14.44□□□□□ -0.1
GABPB1-201ENST00000220429 CAPN9O14815 690 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 ARFIP2P53365 341 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 C14orf80Q86SX3 495 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 FNDC8Q8TC99 324 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 NRDE2Q9H7Z3 1164 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 TIMMDC1Q9NPL8 285 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 ARHGAP20Q9P2F6 1191 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 HDAC9Q9UKV0 1011 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 IGLV3-22A0A075B6J6 115 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 NUDT17P0C025 328 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 NSUN2Q08J23 767 aaKnown RBP eCLIP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 KCNMA1Q12791 1236 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 ITGA9Q13797 1035 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 LRRC14Q15048 493 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 KLHL35Q6PF15 583 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 SYT2Q8N9I0 419 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 BAP1Q92560 729 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 TANGO6Q9C0B7 1094 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 ZHX3Q9H4I2 956 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 DNM3Q9UQ16 869 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 TSC22D4Q9Y3Q8 395 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 FAM32AQ9Y421 112 aaKnown RBP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 EML1O00423 815 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 SPTLC1O15269 473 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 FTCDO95954 541 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 MARK3P27448 753 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 EIF4A3P38919 411 aaKnown RBP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 RASSF2P50749 326 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 CASP5P51878 434 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 NEK3P51956 506 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 CCDC153Q494R4 210 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 NEPROQ6NW34 567 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 CCDC174Q6PII3 467 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 KBTBD2Q8IY47 623 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 GFM2Q969S9 779 aaKnown RBP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 SLC7A6OSQ96CW6 309 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 CEP63Q96MT8 703 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 KIAA1683Q9H0B3 1180 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 BHMT2Q9H2M3 363 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 NDUFA13Q9P0J0 144 aa14.43□□□□□ -0.1
GABPB1-201ENST00000220429 RBBP6Q7Z6E9 1792 aaKnown RBP14.43□□□□□ -0.1
GABPB1-201ENST00000220429 LRRC53A6NM62 1247 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 PALMO75781 387 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 CFBP00751 764 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 ZNF76P36508 570 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 ACVR2BQ13705 512 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 KIF22Q14807 665 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 ZNF394Q53GI3 561 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 C6orf118Q5T5N4 469 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 SLC30A10Q6XR72 485 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 B3GNT6Q6ZMB0 384 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 C4orf50Q6ZRC1 276 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 TAF4BQ92750 862 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 CASP10Q92851 521 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 HSPBAP1Q96EW2 488 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 REEP2Q9BRK0 252 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 WDR18Q9BV38 432 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 CCDC113Q9H0I3 377 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 MARSP56192 900 aaKnown RBP14.42□□□□□ -0.1
GABPB1-201ENST00000220429 RRAGAQ7L523 313 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 GPIHBP1Q8IV16 184 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 TRIM59Q8IWR1 403 aa14.42□□□□□ -0.1
GABPB1-201ENST00000220429 ZC3H3Q8IXZ2 948 aaKnown RBP14.42□□□□□ -0.1
GABPB1-201ENST00000220429 MGARPQ8TDB4 240 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms