RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 TMA16Q96EY4 203 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 CINPQ9BW66 212 aaPredicted RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 TAF1DQ9H5J8 278 aaPredicted RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 ARHGAP26Q9UNA1 814 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 BRAFP15056 766 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 PAN2Q504Q3 1202 aaKnown RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 SARM1Q6SZW1 724 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 MS4A14Q96JA4 679 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 RAD18Q9NS91 495 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 GRIN3BO60391 1043 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 MAN1A2O60476 641 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 GUCY1A2P33402 732 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 PRKCEQ02156 737 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 GPRC5AQ8NFJ5 357 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 TMEM117Q9H0C3 514 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 MYOZ2Q9NPC6 264 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 EHD2Q9NZN4 543 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ZFATQ9P243 1243 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 KRT87PA6NCN2 255 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 MYL2P10916 166 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 SGO1Q5FBB7 561 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 HORMAD1Q86X24 394 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 LRRC71Q8N4P6 559 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 L3MBTL3Q96JM7 780 aaPredicted RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 TASP1Q9H6P5 420 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 GIMAP4Q9NUV9 329 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ZSCAN32Q9NX65 697 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 SLC25A13Q9UJS0 675 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 CDYLQ9Y232 598 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 SLC30A1Q9Y6M5 507 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ESYT3A0FGR9 886 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 GUCA1CO95843 209 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ATP1A1P05023 1023 aaKnown RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 CSE1LP55060 971 aaKnown RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ABCE1P61221 599 aaKnown RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 INPP5AQ14642 412 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 USP10Q14694 798 aaKnown RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 TRADDQ15628 312 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 PHF21AQ96BD5 680 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ZNF556Q9HAH1 456 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 FAM49BQ9NUQ9 324 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 CYTH3O43739 400 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 ORC4O43929 436 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 KRT4P19013 534 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 PBLDP30039 288 aaPredicted RBP11.64□□□□□ -0.55
KNOP1-201ENST00000219837 STRIP1Q5VSL9 837 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 REEP2Q9BRK0 252 aa11.64□□□□□ -0.55
KNOP1-201ENST00000219837 SRP72O76094 671 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 KRT8P05787 483 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 IMPDH2P12268 514 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 HSPA9P38646 679 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 RFC5P40937 340 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 NLRP11P59045 1033 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 DHX34Q14147 1143 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 KHDRBS2Q5VWX1 349 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 HES6Q96HZ4 224 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 GPR63Q9BZJ6 419 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.63□□□□□ -0.556e-7■■■■■ 39.3
KNOP1-201ENST00000219837 H2AFY2Q9P0M6 372 aaPredicted RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 CARSP49589 748 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 MRPL28Q13084 256 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 RFFLQ8WZ73 363 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 BHMTQ93088 406 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 ARHGEF26Q96DR7 871 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 APEX2Q9UBZ4 518 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 UBXN8O00124 270 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 FOXN1O15353 648 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 TBC1D4O60343 1298 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 ODC1P11926 461 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 HPCAP84074 193 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 LAMB3Q13751 1172 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 CYP4A22Q5TCH4 519 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 OOSP2Q86WS3 158 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 IPMKQ8NFU5 416 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 SCUBE2Q9NQ36 999 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 CCDC22O60826 627 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 THPOP40225 353 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 ADAM33Q9BZ11 813 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 GMNCA6NCL1 334 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 AVPR1AP37288 418 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 RCAN1P53805 252 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 SKOR1P84550 965 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 ATP2C1P98194 919 aaPredicted RBP11.63□□□□□ -0.55
KNOP1-201ENST00000219837 CEP55Q53EZ4 464 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 XKR3Q5GH77 459 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 RNF180Q86T96 592 aa11.63□□□□□ -0.55
KNOP1-201ENST00000219837 NLRP14Q86W24 1093 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms