RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 AGRPO00253 132 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 ACO1P21399 889 aaKnown RBP14.53□□□□□ -0.08
SIX4-201ENST00000216513 TUBB4BP68371 445 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 YWHAHQ04917 246 aaPredicted RBP14.53□□□□□ -0.08
SIX4-201ENST00000216513 PURBQ96QR8 312 aaKnown RBP14.53□□□□□ -0.08
SIX4-201ENST00000216513 PI4K2AQ9BTU6 479 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 KLHL11Q9NVR0 708 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 SMARCA1P28370 1054 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 SLC11A2P49281 568 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 CRHR2Q13324 411 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 PDE1CQ14123 709 aaPredicted RBP14.53□□□□□ -0.08
SIX4-201ENST00000216513 BBS9Q3SYG4 887 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 ARHGAP18Q8N392 663 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 RAB42Q8N4Z0 105 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
SIX4-201ENST00000216513 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 TAF6LQ9Y6J9 622 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 DEUP1Q05D60 604 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 MTM1Q13496 603 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 STARD3Q14849 445 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 MPZL3Q6UWV2 235 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 ADCK2Q7Z695 626 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 ADGRF2Q8IZF7 708 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 RSAD1Q9HA92 442 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 KIF20BQ96Q89 1820 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 ENDOD1O94919 500 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 SYF2O95926 243 aaKnown RBP14.53□□□□□ -0.08
SIX4-201ENST00000216513 PCGF5Q86SE9 256 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 DHX38Q92620 1227 aaKnown RBP14.53□□□□□ -0.08
SIX4-201ENST00000216513 NUP85Q9BW27 656 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 ITM2BQ9Y287 266 aa14.53□□□□□ -0.08
SIX4-201ENST00000216513 TJP3O95049 919 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 SMIM10L2AP0DMW4 78 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 SMIM10L2BP0DMW5 78 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 PLD1Q13393 1074 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 RNF19AQ9NV58 838 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 ECEL1O95672 775 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 PTPAQ15257 358 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 PLPP4Q5VZY2 271 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 HEATR6Q6AI08 1181 aaKnown RBP14.52□□□□□ -0.08
SIX4-201ENST00000216513 OR6P1Q8NGX9 317 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 ZCWPW1Q9H0M4 648 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 KCND2Q9NZV8 630 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 TBX20Q9UMR3 447 aa14.52□□□□□ -0.08
SIX4-201ENST00000216513 CLNS1AP54105 237 aaKnown RBP14.52□□□□□ -0.09
SIX4-201ENST00000216513 TFDP2Q14188 446 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 FAM110CQ1W6H9 321 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 JADE1Q6IE81 842 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 CEP68Q76N32 757 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 SMPD4Q9NXE4 827 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 RIC1Q4ADV7 1423 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 SPDYE5A6NIY4 337 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 HLA-DRAP01903 254 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 CDH6P55285 790 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 C18orf8Q96DM3 657 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 TTC7AQ9ULT0 858 aaPredicted RBP14.52□□□□□ -0.09
SIX4-201ENST00000216513 PLA2G4CQ9UP65 541 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 CYP11B2P19099 503 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 PRAMEP78395 509 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 BRD3Q15059 726 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 ENOSF1Q7L5Y1 443 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 KLC2Q9H0B6 622 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 CHST12Q9NRB3 414 aa14.52□□□□□ -0.09
SIX4-201ENST00000216513 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.51□□□□□ -0.09
SIX4-201ENST00000216513 ACSL3O95573 720 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 NAMPTP43490 491 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 ZNF177Q13360 481 aaPredicted RBP14.51□□□□□ -0.09
SIX4-201ENST00000216513 ITGA7Q13683 1181 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 SAMD3Q8N6K7 520 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 BCAS4Q8TDM0 211 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 EFCAB8A8MWE9 144 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 RPA1P27694 616 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 PPIGQ13427 754 aaKnown RBP eCLIP14.51□□□□□ -0.09
SIX4-201ENST00000216513 ZSCAN26Q16670 478 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 MAP3K14Q99558 947 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 HAUS4Q9H6D7 363 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 RWDD2BP57060 319 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 EFEMP1Q12805 493 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 SLMAPQ14BN4 828 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 PPP2R5EQ16537 467 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 NBPF20Q3BBV1 942 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 RBBP8NLQ8NC74 664 aaPredicted RBP14.51□□□□□ -0.09
SIX4-201ENST00000216513 MAGEB5Q9BZ81 275 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 TMEM60Q9H2L4 133 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 CHORDC1Q9UHD1 332 aaPredicted RBP14.51□□□□□ -0.09
SIX4-201ENST00000216513 DSEQ9UL01 958 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 CFAP69A5D8W1 941 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 SNX2O60749 519 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 PAPOLAP51003 745 aaKnown RBP14.51□□□□□ -0.09
SIX4-201ENST00000216513 STILQ15468 1287 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 ANKRD20A3Q5VUR7 823 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 ANGPTL8Q6UXH0 198 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 CPA5Q8WXQ8 436 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 PCDHA13Q9Y5I0 950 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 SREBF1P36956 1147 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 GPC5P78333 572 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 FSTL1Q12841 308 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 PPP2R2DQ66LE6 453 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 EGFL8Q99944 293 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms