RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 RHOP08100 348 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 SYT1P21579 422 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 ZBTB6Q15916 424 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 UVSSAQ2YD98 709 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 DYMQ7RTS9 669 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 TCEAL4Q96EI5 215 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 FAM212AQ96EL1 285 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 MCRS1Q96EZ8 462 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 TBC1D17Q9HA65 648 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 CYP4F11Q9HBI6 524 aa24.11■■□□□ 1.45
VTI1B-201ENST00000216456 ZFHX2Q9C0A1 2572 aaPredicted RBP24.1■■□□□ 1.45
VTI1B-201ENST00000216456 PRRG1O14668 218 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 BMP15O95972 392 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 OR4Q2P0C623 313 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 CEBPBP17676 345 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 CDR1P51861 262 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 NXPE3Q969Y0 559 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 CCSER1Q9C0I3 900 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 KCNG1Q9UIX4 513 aa24.1■■□□□ 1.45
VTI1B-201ENST00000216456 A0A0B4J269 797 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 SLC26A4O43511 780 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 LRRN2O75325 713 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 PIGRP01833 764 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 CORO1BQ9BR76 489 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 MSTO1Q9BUK6 570 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 PLA2G2FQ9BZM2 168 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 FOXQ1Q9C009 403 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 ARHGEF3Q9NR81 526 aa24.09■■□□□ 1.45
VTI1B-201ENST00000216456 MRPS23Q9Y3D9 190 aaKnown RBP24.09■■□□□ 1.45
VTI1B-201ENST00000216456 ARHGEF37A1IGU5 675 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 H0YCG3 227 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 OGTO15294 1046 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 TBCAO75347 108 aaKnown RBP24.08■■□□□ 1.45
VTI1B-201ENST00000216456 VNN2O95498 520 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 DCNP07585 359 aaKnown RBP24.08■■□□□ 1.45
VTI1B-201ENST00000216456 NFICP08651 508 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 POU2F2P09086 479 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 ATF2P15336 505 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 LRPAP1P30533 357 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 DDIT3P35638 169 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 CCR2P41597 374 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 ACOT2P49753 483 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 PPP2R3AQ06190 1150 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 ADCY1Q08828 1119 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 JADE1Q6IE81 842 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 RNF19BQ6ZMZ0 732 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 SFR1Q86XK3 245 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 CCDC105Q8IYK2 499 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 HS6ST3Q8IZP7 471 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 DTWD2Q8NBA8 298 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 KCNN1Q92952 543 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 PANK2Q9BZ23 570 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 RPF1Q9H9Y2 349 aaKnown RBP24.08■■□□□ 1.45
VTI1B-201ENST00000216456 PLEKHA5Q9HAU0 1116 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 DAXXQ9UER7 740 aaPredicted RBP24.08■■□□□ 1.45
VTI1B-201ENST00000216456 PCDHB8Q9UN66 801 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 INSL5Q9Y5Q6 135 aa24.08■■□□□ 1.45
VTI1B-201ENST00000216456 H7C4K7 107 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 SPTLC1O15269 473 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 GFRA3O60609 400 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 LRG1P02750 347 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 ELF1P32519 619 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 NUBP1P53384 320 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 GTF2BQ00403 316 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 KCNA1Q09470 495 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 SNW1Q13573 536 aaKnown RBP24.07■■□□□ 1.44
VTI1B-201ENST00000216456 ZNF280DQ6N043 979 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 ASCL5Q7RTU5 278 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 FRMD5Q7Z6J6 570 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 MAP4K3Q8IVH8 894 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 PGLYRP2Q96PD5 576 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 USP28Q96RU2 1077 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 BACH2Q9BYV9 841 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 CRISPLD1Q9H336 500 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 SLC2A4RGQ9NR83 387 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 TBC1D7Q9P0N9 293 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 CPSF3Q9UKF6 684 aaKnown RBP24.07■■□□□ 1.44
VTI1B-201ENST00000216456 UBQLN1Q9UMX0 589 aaKnown RBP24.07■■□□□ 1.44
VTI1B-201ENST00000216456 MTMR6Q9Y217 621 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 ZFP37Q9Y6Q3 630 aaPredicted RBP24.07■■□□□ 1.44
VTI1B-201ENST00000216456 MYH15Q9Y2K3 1946 aa24.07■■□□□ 1.44
VTI1B-201ENST00000216456 A0A087X0B3 334 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 MYMKA6NI61 221 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 M0QZQ0 153 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 GJA1P17302 382 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 RFX1P22670 979 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 TCEAL8Q8IYN2 117 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 ZSWIM2Q8NEG5 633 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 TMEM209Q96SK2 561 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 FGFBP2Q9BYJ0 223 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 CEP72Q9P209 647 aa24.06■■□□□ 1.44
VTI1B-201ENST00000216456 SRPRBQ9Y5M8 271 aaKnown RBP24.06■■□□□ 1.44
VTI1B-201ENST00000216456 CFAP54Q96N23 3096 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 ADRB2P07550 413 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 CPB1P15086 417 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 GLULP15104 373 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 PTPN2P17706 415 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 TWF1Q12792 350 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 ANGPT1Q15389 498 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 PRSS36Q5K4E3 855 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms