RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 GJB7Q6PEY0 223 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 SYT10Q6XYQ8 523 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 TRAPPC11Q7Z392 1133 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 VSTM4Q8IW00 320 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 HACE1Q8IYU2 909 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 ANKRD36BP1Q96IX9 119 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 LSM14BQ9BX40 385 aaKnown RBP10.72□□□□□ -0.69
RTCB-201ENST00000216038 PLEKHA5Q9HAU0 1116 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 CNTN3Q9P232 1028 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 SIK3Q9Y2K2 1263 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 STX10O60499 249 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 HLA-DRAP01903 254 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 TNNC2P02585 160 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 ITGB3P05106 788 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 IVLP07476 585 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 PIK3CAP42336 1068 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 PLA2G4AP47712 749 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 KCNJ6P48051 423 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 FAM189BP81408 668 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 DEFB103AP81534 67 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 FPGSQ05932 587 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 SURF1Q15526 300 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 CLLU1OSQ5K130 101 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 SPECC1LQ69YQ0 1117 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 SPOPLQ6IQ16 392 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 TMCO3Q6UWJ1 677 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 ZNF365Q70YC5 407 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
RTCB-201ENST00000216038 C1orf127Q8N9H9 656 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 FBXL13Q8NEE6 735 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 CACTINQ8WUQ7 758 aaKnown RBP10.72□□□□□ -0.69
RTCB-201ENST00000216038 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 PGBD4Q96DM1 585 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 ERGIC2Q96RQ1 377 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 RPS6KC1Q96S38 1066 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 INTS2Q9H0H0 1204 aaKnown RBP10.72□□□□□ -0.69
RTCB-201ENST00000216038 IL23AQ9NPF7 189 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 C1orf112Q9NSG2 853 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 SIX4Q9UIU6 781 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 LRFN2Q9ULH4 789 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 PCDHB7Q9Y5E2 793 aa10.72□□□□□ -0.69
RTCB-201ENST00000216038 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 RNF225M0QZC1 329 aaPredicted RBP10.71□□□□□ -0.69
RTCB-201ENST00000216038 PPEF2O14830 753 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 EOMESO95936 686 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 SKIP12755 728 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 TRIM21P19474 475 aaKnown RBP10.71□□□□□ -0.69
RTCB-201ENST00000216038 GTF2H1P32780 548 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 MCCD1P59942 119 aaPredicted RBP10.71□□□□□ -0.69
RTCB-201ENST00000216038 MYL6P60660 151 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 NCOA4Q13772 614 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 EPC2Q52LR7 807 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 TRIM65Q6PJ69 517 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 SRLQ86TD4 932 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 LMO3Q8TAP4 145 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 EXOC4Q96A65 974 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 RAB20Q9NX57 234 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 TMEM161AQ9NX61 479 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 DPP3Q9NY33 737 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 C2CD2Q9Y426 696 aa10.71□□□□□ -0.69
RTCB-201ENST00000216038 A0A1W2PQC6 194 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 N4BP1O75113 896 aaKnown RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 THP07101 528 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 IGFBP6P24592 240 aaPredicted RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 POLR2BP30876 1174 aaKnown RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 CLCN6P51797 869 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 CETN1Q12798 172 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 ZBTB6Q15916 424 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 FNDC1Q4ZHG4 1894 aaPredicted RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 XKR4Q5GH76 650 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 GLB1LQ6UWU2 654 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 RRAGAQ7L523 313 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 CD302Q8IX05 232 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 PPP1R10Q96QC0 940 aaKnown RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.7□□□□□ -0.71e-7■■□□□ 11.7
RTCB-201ENST00000216038 PAAF1Q9BRP4 392 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 NLRC4Q9NPP4 1024 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 ST7Q9NRC1 585 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 HCSTQ9UBK5 93 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 AJAP1Q9UKB5 411 aaPredicted RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 AGAP1Q9UPQ3 857 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 PTPRSQ13332 1948 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 CASTOR2A6NHX0 329 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 B4GALT3O60512 393 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 NOL4O94818 638 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 GYPCP04921 128 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 KCNE1P15382 129 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 CASP14P31944 242 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 POLR2FP61218 127 aaKnown RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 WDR5P61964 334 aaKnown RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 POU5F1Q01860 360 aaKnown RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 PPIGQ13427 754 aaKnown RBP eCLIP10.7□□□□□ -0.7
RTCB-201ENST00000216038 TRPC3Q13507 836 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 ARID5BQ14865 1188 aa10.7□□□□□ -0.7
RTCB-201ENST00000216038 PAN2Q504Q3 1202 aaKnown RBP10.7□□□□□ -0.7
RTCB-201ENST00000216038 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms