RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ICA1LQ8NDH6 482 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 RIOK1Q9BRS2 568 aaKnown RBP12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 MTMR4Q9NYA4 1195 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 FAM198AQ9UFP1 575 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 ABCB11O95342 1321 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 NWD2Q9ULI1 1742 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 GPC4O75487 556 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 PON1P27169 355 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 PPP4CP60510 307 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 ANO5Q75V66 913 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 NLRP9Q7RTR0 991 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 NUDCD3Q8IVD9 361 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 MREGQ8N565 214 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 H3BRJ5 948 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 WNT7AO00755 349 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 SLC37A4O43826 429 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 ZC2HC1CQ53FD0 456 aaPredicted RBP12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 ERMARDQ5T6L9 678 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 BTNL9Q6UXG8 535 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 MCF2L2Q86YR7 1114 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 RHOT1Q8IXI2 618 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 ADGRF4Q8IZF3 695 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 NEU2Q9Y3R4 380 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 FZD9O00144 591 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 TLR3O15455 904 aaKnown RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 DRD4P21917 467 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 EVX2Q03828 476 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 TRIP10Q15642 601 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 QRICH1Q2TAL8 776 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 AFAP1L2Q8N4X5 818 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 KCTD6Q8NC69 237 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 ZNF784Q8NCA9 323 aaPredicted RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 MED15Q96RN5 788 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 RANBP17Q9H2T7 1088 aaKnown RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 O00370 1275 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 DNM1LO00429 736 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 CASP4P49662 377 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 PTENP60484 403 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 ART3Q13508 389 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 HIF1AQ16665 826 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 ANKRD20A4Q4UJ75 823 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SNRNP27Q8WVK2 155 aaKnown RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 PPP1R16BQ96T49 567 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 OSBPL7Q9BZF2 842 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 XAB2Q9HCS7 855 aaKnown RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SIK3Q9Y2K2 1263 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 PDHXO00330 501 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SNX3O60493 162 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SHBGP04278 402 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 ACADSP16219 412 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 HIC1Q14526 733 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 RPS6KA2Q15349 733 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 CXorf38Q8TB03 319 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 BTBD6Q96KE9 485 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SEPT10Q9P0V9 454 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 FAM208AQ9UK61 1670 aaKnown RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 MAGED2Q9UNF1 606 aaPredicted RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SLC12A2P55011 1212 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SMAD1Q15797 465 aaKnown RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SYCP2LQ5T4T6 812 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 BZW1Q7L1Q6 419 aaKnown RBP12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 PDZD8Q8NEN9 1154 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 RMDN3Q96TC7 470 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 MMP19Q99542 508 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SH2D3AQ9BRG2 576 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 HEY2Q9UBP5 337 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 PCDHGC5Q9Y5F6 944 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 SCINQ9Y6U3 715 aa12.17□□□□□ -0.46
DNMT3B-201ENST00000201963 MAGEA13PA6NCF6 341 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 ZNF263O14978 683 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 BTKQ06187 659 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 NOGQ13253 232 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 FAF2Q96CS3 445 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 SERPINI1Q99574 410 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 ZSWIM1Q9BR11 485 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 WWP1Q9H0M0 922 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 FIS1Q9Y3D6 152 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 ARHGAP10A1A4S6 786 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 CRCPO75575 148 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 TMEM191BP0C7N4 346 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 NT5C2P49902 561 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 PADI6Q6TGC4 694 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 TMEM270Q6UE05 265 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 CRELD2Q6UXH1 353 aaPredicted RBP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 PGM2Q96G03 612 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 NSL1Q96IY1 281 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms