RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ANKEF1Q9NU02 776 aa12.81□□□□□ -0.36
CHPF2-201ENST00000035307 MAFGO15525 162 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 POLR2BP30876 1174 aaKnown RBP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 PPP2R5EQ16537 467 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 FBXW10Q5XX13 1052 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 LRRC55Q6ZSA7 311 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 GRK7Q8WTQ7 553 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 C18orf8Q96DM3 657 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 JPH2Q9BR39 696 aaPredicted RBP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 EDEM3Q9BZQ6 932 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 A0A1W2PQJ5 194 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 TGFB1I1O43294 461 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 GJB6O95452 261 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 TNFSF9P41273 254 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 IRAK1P51617 712 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 GPC3P51654 580 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 ACTN3Q08043 901 aaPredicted RBP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 KCNMA1Q12791 1236 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 ACVR2BQ13705 512 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 NCOA4Q13772 614 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 TRIM68Q6AZZ1 485 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 ANKMY2Q8IV38 441 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 SLC35C1Q96A29 364 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 ATP6V1G3Q96LB4 118 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 NPTXRO95502 500 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 CDH8P55286 799 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 SLC8A3P57103 927 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 ZNF200P98182 395 aaPredicted RBP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 KRT17Q04695 432 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 ITIH3Q06033 890 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 DAB2IPQ5VWQ8 1189 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 PAPD7Q5XG87 772 aaKnown RBP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 DARS2Q6PI48 645 aaKnown RBP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 SV2AQ7L0J3 742 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 SLC47A2Q86VL8 602 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 INPP4AQ96PE3 977 aaPredicted RBP12.8□□□□□ -0.36
CHPF2-201ENST00000035307 DNAI2Q9GZS0 605 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 SIK3Q9Y2K2 1263 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 SYNGAP1Q96PV0 1343 aa12.8□□□□□ -0.36
CHPF2-201ENST00000035307 ZNF263O14978 683 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 EDIL3O43854 480 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 AOC2O75106 756 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 DGKDQ16760 1214 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 MFSD14CQ5VZR4 134 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 MAIP1Q8WWC4 291 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 SMC6Q96SB8 1091 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 MRPL47Q9HD33 250 aaKnown RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TAS2R14Q9NYV8 317 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 G3BP2Q9UN86 482 aaKnown RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 ASTN1O14525 1302 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 IGSF9BQ9UPX0 1349 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 ADRB2P07550 413 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 ADORA2BP29275 332 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 SPIRE1Q08AE8 756 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 GPS1Q13098 491 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 GLE1Q53GS7 698 aaKnown RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 ANKRD20A3Q5VUR7 823 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 ARHGEF19Q8IW93 802 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TSEN2Q8NCE0 465 aaKnown RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TSNARE1Q96NA8 513 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TINF2Q9BSI4 451 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 NID2Q14112 1375 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 HBP1O60381 514 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 KCNA2P16389 499 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 KYNUQ16719 465 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 SLFN12LQ6IEE8 588 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 RGMBQ6NW40 437 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TARSL2A2RTX5 802 aaKnown RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 LGALS2P05162 132 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 GLRA2P23416 452 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 LAMC2Q13753 1193 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 RCN2Q14257 317 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 CFAP157Q5JU67 520 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 FYB2Q5VWT5 728 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TLK2Q86UE8 772 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 MCUR1Q96AQ8 359 aa12.79□□□□□ -0.36
CHPF2-201ENST00000035307 TIMM13Q9Y5L4 95 aaPredicted RBP12.79□□□□□ -0.36
CHPF2-201ENST00000035307 C4AP0C0L4 1744 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 ITGB3P05106 788 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 VPS52Q8N1B4 723 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 SMYD2Q9NRG4 433 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 RASA4BC9J798 803 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 RASA4O43374 803 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 YY1P25490 414 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 THPOP40225 353 aa12.78□□□□□ -0.36
CHPF2-201ENST00000035307 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms