RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 BLOC1S4Q9NUP1 217 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
ERCC1-201ENST00000013807 NUB1Q9Y5A7 615 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 FRYLO94915 3013 aa17.32■□□□□ 0.36
ERCC1-201ENST00000013807 STK25O00506 426 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 ELF1P32519 619 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 ABCD1P33897 745 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
ERCC1-201ENST00000013807 UBA7P41226 1012 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 PFKPQ01813 784 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 PRSS36Q5K4E3 855 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
ERCC1-201ENST00000013807 POTEHQ6S545 545 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 BRAPQ7Z569 592 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 BEST2Q8NFU1 509 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 LRRC15Q8TF66 581 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 PLIN2Q99541 437 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 REEP2Q9BRK0 252 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 ANKFY1Q9P2R3 1169 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 AFF4Q9UHB7 1163 aaKnown RBP17.31■□□□□ 0.36
ERCC1-201ENST00000013807 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
ERCC1-201ENST00000013807 DCHS1Q96JQ0 3298 aa17.31■□□□□ 0.36
ERCC1-201ENST00000013807 TCHHQ07283 1943 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 A0A0B4J269 797 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 NPHP3-ACAD11A0A0J9YXS1 232 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 KANSL1LA0AUZ9 987 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 SEC24AO95486 1093 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 LRG1P02750 347 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 CXCL8P10145 99 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 PAX3P23760 479 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 EPHA5P54756 1037 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 CTXN3Q4LDR2 81 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 SEZ6Q53EL9 994 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 SLC44A4Q53GD3 710 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 ZNF280DQ6N043 979 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 ELSPBP1Q96BH3 223 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 CALML4Q96GE6 196 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 FIZ1Q96SL8 496 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 CCSER1Q9C0I3 900 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 ST6GALNAC4Q9H4F1 302 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 UPF2Q9HAU5 1272 aaKnown RBP17.3■□□□□ 0.36
ERCC1-201ENST00000013807 UBQLN1Q9UMX0 589 aaKnown RBP17.3■□□□□ 0.36
ERCC1-201ENST00000013807 INSL5Q9Y5Q6 135 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 COL4A2P08572 1712 aa17.3■□□□□ 0.36
ERCC1-201ENST00000013807 DENND4CQ5VZ89 1909 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 PRRG1O14668 218 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 ZNF197O14709 1029 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 OGTO15294 1046 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 HARSP12081 509 aaKnown RBP17.29■□□□□ 0.36
ERCC1-201ENST00000013807 GLULP15104 373 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 MCM4P33991 863 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 GTF2BQ00403 316 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 POU5F1Q01860 360 aaKnown RBP17.29■□□□□ 0.36
ERCC1-201ENST00000013807 MLF2Q15773 248 aaPredicted RBP17.29■□□□□ 0.36
ERCC1-201ENST00000013807 CD302Q8IX05 232 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 BORCS6Q96GS4 357 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 PARVGQ9HBI0 331 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 CYP4F11Q9HBI6 524 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 TUBGCP4Q9UGJ1 667 aa17.29■□□□□ 0.36
ERCC1-201ENST00000013807 TSC2P49815 1807 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 XPOTO43592 962 aaKnown RBP17.28■□□□□ 0.36
ERCC1-201ENST00000013807 TRAK2O60296 914 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 DCNP07585 359 aaKnown RBP17.28■□□□□ 0.36
ERCC1-201ENST00000013807 RFX1P22670 979 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-201ENST00000013807 SNW1Q13573 536 aaKnown RBP17.28■□□□□ 0.36
ERCC1-201ENST00000013807 CUL4AQ13619 759 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
ERCC1-201ENST00000013807 GPBP1Q86WP2 473 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 C1orf210Q8IVY1 113 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 LEMD2Q8NC56 503 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 ST13P5Q8NFI4 369 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-201ENST00000013807 NELL2Q99435 816 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 CPSF3Q9UKF6 684 aaKnown RBP17.28■□□□□ 0.36
ERCC1-201ENST00000013807 STYXL1Q9Y6J8 313 aa17.28■□□□□ 0.36
ERCC1-201ENST00000013807 COL4A3Q01955 1670 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 LACTBL1A8MY62 500 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 HNRNPDLO14979 420 aaKnown RBP17.27■□□□□ 0.36
ERCC1-201ENST00000013807 PLCG1P19174 1290 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 FCARP24071 287 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 MARCKSP29966 332 aaPredicted RBP17.27■□□□□ 0.36
ERCC1-201ENST00000013807 DDIT3P35638 169 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 TNFSF9P41273 254 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 MAGEA9P43362 315 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 LIG4P49917 911 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 YWHAHQ04917 246 aaPredicted RBP17.27■□□□□ 0.36
ERCC1-201ENST00000013807 GRIN1Q05586 938 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 ADCY1Q08828 1119 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 SPATA1Q5VX52 437 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 SLC39A4Q6P5W5 647 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 MAP4K3Q8IVH8 894 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 MYCT1Q8N699 235 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 ING5Q8WYH8 240 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 RAD54LQ92698 747 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 CLDN23Q96B33 292 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms