RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Kcnd1Q03719 651 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Nars2Q8BGV0 477 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Mss51Q9D5Z5 446 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ptk2bQ9QVP9 1009 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 FscbA1EGX6 1074 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Sat1P48026 171 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Crnkl1P63154 690 aaKnown RBP9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Flt3Q00342 1000 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Q3UJP5 209 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Amz1Q8BVF9 502 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Setdb2Q8C267 713 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Adgra1Q8C4G9 578 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 CntrobQ8CB62 887 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 N4bp2l2Q8JZS6 575 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rpa3Q9CQ71 121 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Pramef20B1ARV6 477 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm4871D3Z0W7 314 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Aff1O88573 1216 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Pstpip1P97814 415 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 MtbpQ8BJS8 894 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tspan9Q8BJU2 239 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Osbpl6Q8BXR9 959 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Reep2Q8VCD6 254 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rpa1Q8VEE4 623 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Slc44a4Q91VA1 707 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Pcdha5Q91Y15 934 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Aff4Q9ESC8 1160 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PpieQ9QZH3 301 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Plod1Q9R0E2 728 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fkbp8O35465 402 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Atp13a5Q3TYU2 1216 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rnf10Q3UIW5 804 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Dnajc8Q6NZB0 253 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Znf12Q7TSI0 686 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gtf2a1lQ8R4I4 468 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Bcs1lQ9CZP5 418 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm3460E9QAI8 215 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Guca2bO09051 106 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Mettl17Q3U2U7 461 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Adad1Q5SUE7 619 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Atp13a4Q5XF90 1193 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ddx5Q61656 614 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Pcp4l1Q6W8Q3 68 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Q8BGD0 127 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Foxp3Q99JB6 429 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Q9CR55 154 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 OoepQ9CWE6 164 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Sall1Q9ER74 1322 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Col16a1Q8BLX7 1580 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm21149A0A0G2JFY7 255 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Mageb2A2AHM0 380 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Card9A2AIV8 536 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm5689F6Y2A6 97 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Speer4cG3UXD1 256 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm17019K7N6W5 255 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Bub1O08901 1058 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 GalcP54818 684 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Smyd5Q3TYX3 416 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Armc7Q3UJZ3 198 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Krt35Q497I4 455 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fam169aQ5XG69 665 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Oca2Q62052 833 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Stxbp2Q64324 593 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm9758Q80ZT2 255 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Dlg1Q811D0 905 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 DseQ8BLI4 958 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ccdc17Q8CE13 565 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Adprhl2Q8CG72 370 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Olfr1494Q8VGP8 315 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 ChiaQ91XA9 473 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 BcamQ9R069 622 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Nlrp4eQ66X19 978 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Atl2Q6PA06 583 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Atp6v0d2Q80SY3 350 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Phf8Q80TJ7 1023 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Pak4Q8BTW9 593 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ago2Q8CJG0 860 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Vmn1r214Q8R279 367 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ces1fQ91WU0 561 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Traf7Q922B6 594 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Unc45aQ99KD5 944 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PpihQ9D868 188 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 CtsfQ9R013 462 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Extl3Q9WVL6 918 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Atp9bP98195 1146 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gpr101Q80T62 511 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Smtnl2Q8CI12 456 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 OafQ8QZR4 282 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Afg3l1Q920A7 789 aaKnown RBP9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 ThegQ9JMB1 375 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Nr1h3Q9Z0Y9 445 aa9.68□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Oip5A2AQ14 241 aa9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Zfp212G3X8R7 492 aa9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 SfnO70456 248 aaKnown RBP9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Drp2Q05AA6 957 aa9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Heatr9Q5QNV8 569 aa9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Mapre1Q61166 268 aaKnown RBP9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Clca4aQ6Q473 924 aa9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tdpoz2Q717B2 364 aa9.67□□□□□ -0.86
Scn8a-213ENSMUST00000201549 LdhdQ7TNG8 484 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms