RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Cand2Q6ZQ73 1235 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Thoc5Q8BKT7 683 aaKnown RBP13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cul3Q9JLV5 768 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Add3Q9QYB5 706 aaKnown RBP13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Map3k6Q9WTR2 1291 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm7356A0A087WSA6 508 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Klc2O88448 599 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Rbm20Q3UQS8 1199 aaKnown RBP13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm2163Q6PCY5 473 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tmem270Q6UJB9 264 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Wdr91Q7TMQ7 748 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Spice1Q8C804 860 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Dcaf6Q9DC22 876 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Fam228bQ497Q6 232 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Kcnk18Q6VV64 394 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Rmdn2Q8BSE0 410 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Nt5c3aQ9D020 331 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tgm5Q9D7I9 724 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 CdylQ9WTK2 593 aa13.12□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Arhgap6O54834 987 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gsta3P30115 221 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm1604bQ3TRG0 118 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Fam169aQ5XG69 665 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ptk6Q64434 451 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ttc7aQ8BGB2 858 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Afg3l2Q8JZQ2 802 aaKnown RBP13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Dnajc3Q91YW3 504 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cyp3a44Q9EQW4 504 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Kiaa0556Q8C753 1610 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Eef2kO08796 724 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 StrnO55106 780 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Pms2P54279 859 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Rab6bP61294 208 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Carmil2Q3V3V9 1296 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tshz1Q5DTH5 1084 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Znf569Q80W31 679 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Haus7Q8BKT8 364 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 RbakQ8BQC8 711 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Agap1Q8BXK8 857 aaKnown RBP13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 ArpinQ9D0A3 226 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tekt1Q9DAJ2 418 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Mroh2aD3Z750 1679 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 AV320801A2AWL3 467 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 6030498E09RikB1AX85 169 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm15023L7MUB4 467 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Olfm3P63056 478 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Msx3P70354 204 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Slitrk1Q810C1 696 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cpa5Q8R4H4 436 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gtf2h3Q8VD76 309 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Mtif2Q91YJ5 727 aaKnown RBP13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Abca6Q8K441 1624 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Vps33bP59016 617 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ttbk2Q3UVR3 1243 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tfdp2Q64163 446 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Kbtbd4Q8R179 534 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Olfr395Q8VGR3 312 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Rbm6S4R1W5 1118 aaKnown RBP13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gm20911A0A087WSS0 222 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cyp3a59D3Z2W7 503 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Gap43P06837 227 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Psmb9P28076 219 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Celf1P28659 486 aaKnown RBP13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Krt2Q3TTY5 707 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tatdn3Q3U1C6 294 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Tcp10aQ80W76 438 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Trip10Q8CJ53 603 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Atp8b5A3FIN4 1183 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Serpina5P70458 405 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Znf280dQ68FE8 974 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Usp7Q6A4J8 1103 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 GanQ8CA72 597 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Pip4k2cQ91XU3 421 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Unc45aQ99KD5 944 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Dhx30Q99PU8 1217 aaKnown RBP13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Fam84aQ9D650 292 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cse1lQ9ERK4 971 aaKnown RBP13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cog8Q9JJA2 640 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Sertad1Q9JL10 236 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Erbb3Q61526 1339 aa13.11□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Axdnd1Q3UZ57 424 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Snip1Q8BIZ6 383 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Nmrk1Q91W63 195 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 B3galt4Q9Z0F0 371 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 GclmO09172 274 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Wfs1P56695 890 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Ppp4r3cQ3V0Y1 813 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Zfp512bQ6PHP4 879 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Zfp454Q80Y34 536 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Mb21d2Q8C525 428 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Kctd2Q8CEZ0 266 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Q91WD4 421 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Smyd3Q9CWR2 428 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 PfkpQ9WUA3 784 aaKnown RBP13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Q14AM7 275 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Cnot7Q60809 285 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Hat1Q8BY71 416 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 HpgdQ8VCC1 269 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Mageb3Q9D2H4 330 aa13.1□□□□□ -0.31
Col6a3-208ENSMUST00000188587 Neu2Q9JMH3 379 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms