RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Gm20820A0A087WPP3 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm20937A0A087WQA3 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm21258A0A087WQC7 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm28102A0A087WQL3 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm21095A0A087WR14 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm20792A0A087WRF5 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm21865A0A087WRL2 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm28576A0A087WRP6 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm28490A0A087WRT9 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm21294A0A087WS79 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm20824A0A087WS97 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm21996A0A087WSS9 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm28870A0A0A6YW38 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm29866A0A0A6YX04 222 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 GclmO09172 274 aaKnown RBP10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 RadilQ69Z89 1099 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Dennd2cQ6P9P8 914 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm21627Q810R0 219 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Elmo2Q8BHL5 732 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Q8BL95 290 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Tmtc3Q8BRH0 920 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Kbtbd4Q8R179 534 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Skp1Q9WTX5 163 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 WapP01173 134 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gp1bbP56400 206 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Prkaa1Q5EG47 559 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Zswim9Q6DI92 447 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Slc13a3Q91Y63 600 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm43638A0A0J9YU36 694 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Myo1aO88329 1043 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ccnt2Q7TQK0 723 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Calhm6Q8C9E8 313 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Fam32aQ9CR80 112 aaKnown RBP10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ing2Q9ESK4 281 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm45261A0A1B0GSP6 197 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Nckap1P28660 1128 aaKnown RBP10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Arhgap44Q5SSM3 814 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Hesx1Q61658 185 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Fbxl13Q8CDU4 790 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Cnot3Q8K0V4 751 aaKnown RBP10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ndufs3Q9DCT2 263 aaKnown RBP10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 DmtnQ9WV69 405 aa10.91□□□□□ -0.66
Scn9a-201ENSMUST00000100063 1700016G14RikA0A286YCZ6 238 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 FancfE9Q5Z5 343 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Akap1O08715 857 aaKnown RBP10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Kcnh2O35219 1162 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Rpl10aP53026 217 aaKnown RBP10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ptgs2Q05769 604 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Usp7Q6A4J8 1103 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Acsf2Q8VCW8 615 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Atpaf2Q91YY4 289 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 S100pbpQ9D5K4 396 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Cpb2Q9JHH6 422 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 1700113H08RikE9Q9Q5 327 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm5689F6Y2A6 97 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ifit3Q64345 403 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Rad9bQ6WBX7 403 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Iqcf1Q9D9K8 182 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Klhl41A2AUC9 606 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm3460E9QAI8 215 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ifi206G3UZV2 921 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ints9Q8K114 658 aaKnown RBP10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Dhx35A2ACQ1 703 aaKnown RBP10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 AaasP58742 546 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Smad1P70340 465 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Npas2P97460 816 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 WhammQ571B6 793 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Zbtb33Q8BN78 671 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Kcnk13Q8R1P5 405 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 MycbpQ9EQS3 103 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Cyth2P63034 400 aaKnown RBP10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Arl13bQ640N2 427 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Casc4Q6P2L7 435 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Zbtb39Q6PDK0 712 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Unc5clQ6R653 518 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Q8BP99 230 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Phf20l1Q8CCJ9 1013 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Khdc3Q9CWU5 440 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Tmem2Q5FWI3 1383 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm21488A0A087WR99 222 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm7168A0AUV4 508 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Fam209A2APA5 170 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Zfy2P20662 777 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Mbl1P39039 239 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Eif3eP60229 445 aaKnown RBP10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ppp4r3cQ3V0Y1 813 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Sept9Q80UG5 583 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Pdk1Q8BFP9 434 aaKnown RBP10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Tceal1Q921P9 165 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Fbxo32Q9CPU7 355 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 MymkQ9D1N4 221 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 1700109H08RikQ9D9C0 210 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Ern1Q9EQY0 977 aa10.9□□□□□ -0.66
Scn9a-201ENSMUST00000100063 Gm13023A2A8N2 498 aa10.9□□□□□ -0.67
Scn9a-201ENSMUST00000100063 Uchl4P58321 233 aa10.9□□□□□ -0.67
Scn9a-201ENSMUST00000100063 Elac2Q80Y81 831 aaKnown RBP10.9□□□□□ -0.67
Scn9a-201ENSMUST00000100063 Ints4Q8CIM8 964 aa10.9□□□□□ -0.67
Scn9a-201ENSMUST00000100063 Arl2bpQ9D385 163 aa10.9□□□□□ -0.67
Scn9a-201ENSMUST00000100063 Anxa9Q9JHQ0 345 aa10.9□□□□□ -0.67
Scn9a-201ENSMUST00000100063 1700024B05RikE9Q6D7 167 aa10.9□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms