RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Rasgef1cQ9D300 466 aa8.05□□□□□ -1.12
Trim40-201ENSMUST00000087158 Slc5a4aQ9ET37 656 aa8.05□□□□□ -1.12
Trim40-201ENSMUST00000087158 Scgb2b12S4R2L0 112 aa8.05□□□□□ -1.12
Trim40-201ENSMUST00000087158 1700064H15RikD3Z4D4 81 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ankrd65F6YK91 380 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Gm6121L7MUF1 212 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Kng1O08677 661 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Hnrnph1O35737 449 aaKnown RBP8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 TyrobpO54885 114 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 IapP03975 557 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Rbp3P49194 1234 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Hnrnph2P70333 449 aaKnown RBP8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Mark2Q05512 776 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Tex11Q14AT2 947 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 MlxipQ2VPU4 917 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Pnpla5Q32LZ8 432 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Upf3bQ3ULL6 472 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Cfap52Q5F201 620 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Vav2Q60992 868 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Skiv2lQ6NZR5 1244 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Rpf1Q7TND5 349 aaKnown RBP8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Spag7Q7TNE3 227 aaKnown RBP8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Olfr392Q7TRX6 312 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Phf8Q80TJ7 1023 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Llgl1Q80Y17 1036 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Grik4Q8BMF5 956 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Il33Q8BVZ5 266 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ythdf3Q8BYK6 585 aaKnown RBP8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Elmo3Q8BYZ7 720 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Usp20Q8C6M1 916 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Lamtor4Q8CF66 99 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 ClasrpQ8CFC7 668 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Stxbp5Q8K400 1152 aaKnown RBP8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Tbx22Q8K402 517 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 CtsqQ91ZF4 343 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Trim66Q924W6 1242 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Arl2bpQ9D385 163 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Rnf225Q9D7D1 332 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ccdc91Q9D8L5 442 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Rnf14Q9JI90 485 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Grk1Q9WVL4 564 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Kcnd2Q9Z0V2 630 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ralgapa2A3KGS3 1872 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Arid2E9Q7E2 1828 aa8.04□□□□□ -1.12
Trim40-201ENSMUST00000087158 Cdr2lA2A6T1 465 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ptpn3A2ALK8 913 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Stk10O55098 966 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ifnb1P01575 182 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Mucl2P02815 138 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Becn2P0DM65 447 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Tnnc2P20801 160 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Slc1a1P51906 523 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Mybl1P51960 751 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ndufs6P52503 116 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Opa1P58281 960 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Irx1P81068 480 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Flt3Q00342 1000 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Asprv1Q09PK2 339 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Mgat3Q10470 538 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Palb2Q3U0P1 1104 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Trip13Q3UA06 432 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Tmprss11aQ3UQ41 389 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Nr1d1Q3UV55 615 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ctc1Q5SUQ9 1212 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Mybpc2Q5XKE0 1136 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Myl6Q60605 151 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Samhd1Q60710 627 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Ift20Q61025 132 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Sema5aQ62217 1077 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Znf12Q7TSI0 686 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Usp6nlQ80XC3 819 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Cwf19l2Q8BG79 887 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Myef2Q8C854 591 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 GneQ91WG8 722 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Pcdhgb4Q91XX6 912 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Socs4Q91ZA6 436 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Lztr1Q9CQ33 837 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Dph5Q9CWQ0 281 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Polr3eQ9CZT4 710 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Mettl7bQ9DD20 244 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Msgn1Q9JK54 188 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Rfx5Q9JL61 658 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Trpc3Q9QZC1 836 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Tnfrsf10bQ9QZM4 381 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Gm28036V9GXJ1 658 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Tmem131O70472 1877 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Nfx1B1AY10 1114 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Gm4846B2RWH8 538 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Trim30cD3YVI9 513 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Myo1eE9Q634 1107 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Gm17535J3KMR8 224 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 CaluO35887 315 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Serpinh1P19324 417 aaKnown RBP8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 NsfP46460 744 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 UrosP51163 265 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Rhox5P52651 210 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 LipeP54310 759 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Arf4P61750 180 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Rad54lP70270 747 aa8.03□□□□□ -1.12
Trim40-201ENSMUST00000087158 Cdca2Q14B71 982 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms