RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 LbrQ3U9G9 626 aaKnown RBP11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Sfi1Q3UZY0 1216 aaKnown RBP11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Lrrc8bQ5DU41 803 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Ncoa4Q5U4H9 625 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Akap4Q60662 849 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Klra8Q60682 266 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Fam102aQ78T81 392 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Ppp2r1bQ7TNP2 601 aaKnown RBP11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Suz12Q80U70 741 aaKnown RBP11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Usp1Q8BJQ2 784 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Dpp9Q8BVG4 862 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Zc3h6Q8BYK8 1177 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Pdia6Q922R8 440 aaKnown RBP11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Zmynd10Q99ML0 440 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Lsm7Q9CQQ8 103 aaKnown RBP11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Lrrc71Q9D3W5 558 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 4933425L06RikQ9D3Z8 585 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Gm5415E9PXF3 478 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Gm6408J3QNG1 320 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Cd40lgP27548 260 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Mapkapk2P49138 386 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Znf827Q505G8 1078 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Adora1Q60612 326 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Irak1Q62406 710 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 GypcQ78HU7 95 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Rd3Q8BRE0 195 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Slc9b1Q8C0X2 565 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Golph3lQ8R088 285 aaKnown RBP11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Cyp4f14Q9EP75 524 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Olfr711Q9EPG2 314 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Actl7aQ9QY84 440 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Rfx7F8VPJ6 1459 aa11.75□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Scgb2b18A0A087WPA9 112 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 B020011L13RikA0A087WQI7 412 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Hsf3D0VYS2 492 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 D830030K20RikE9PYQ5 218 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Vmn2r38G3UYA8 861 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Gm3043K7N693 218 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Vmn2r33K7N705 861 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Vmn2r44L7N2E1 861 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Foxm1O08696 760 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Spata21Q8BHW6 681 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Cdc73Q8JZM7 531 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 GgcxQ9QYC7 757 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Khdrbs2Q9WU01 349 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Synj1Q8CHC4 1574 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Gm3182K7N6T8 263 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Gm8011K7N6Y5 207 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 ClockO08785 855 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Kcnh2O35219 1162 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Msh2P43247 935 aaKnown RBP11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Col6a1Q04857 1025 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 C1orf109Q499E6 217 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Usp28Q5I043 1051 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Tfe3Q64092 572 aaKnown RBP11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Rexo4Q6PAQ4 432 aaKnown RBP11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 AgpsQ8C0I1 645 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Ccdc28bQ8CEG5 200 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Srgap2Q91Z67 1071 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 SelenosQ9BCZ4 190 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 H2afyQ9QZQ8 372 aaKnown RBP11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Gm43518A0A0G2JGB6 165 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Prss51A0A286YDY8 319 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Eddm13E9Q7F5 164 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Ccdc149F6V035 524 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 MybP06876 636 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 DnttP09838 530 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 CatspereP0DP43 985 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Tap1P21958 724 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Serpina3mQ03734 418 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Pick1Q62083 416 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 RetsatQ64FW2 609 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Mlc1Q8VHK5 382 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Taldo1Q93092 337 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Med24Q99K74 987 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Mei1Q9D4I2 1268 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Add3Q9QYB5 706 aaKnown RBP11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Vav3Q9R0C8 847 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Nr1h3Q9Z0Y9 445 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Mlh3A0A1Y7VMP7 1443 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Gm11027G8JL69 66 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 CratP47934 626 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 YwhazP63101 245 aaKnown RBP11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Cct3P80318 545 aaKnown RBP11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Tbc1d22bQ80VE5 505 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Psmd5Q8BJY1 504 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Defb15Q8R2I5 79 aa11.74□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Olfr292F8VQ84 308 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Tph1P17532 447 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Tlr8P58682 1032 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Spout1Q3UHX9 385 aaKnown RBP11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Epb41l5Q8BGS1 731 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Fbxo44Q8BK26 255 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Sulf1Q8K007 870 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 HmcesQ8R1M0 353 aaKnown RBP11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Tnfaip8Q921Z5 198 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 PyglQ9ET01 850 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Sik3Q6P4S6 1311 aa11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Msh6P54276 1358 aaKnown RBP11.73□□□□□ -0.53
Rtn3-202ENSMUST00000065304 Mup6A2AV72 179 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms