RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Scn5aQ9JJV9 2019 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm10721J3QPJ9 223 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Itgb3O54890 787 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tnfaip1O70479 316 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 DtnbO70585 659 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Yap1P46938 488 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Klra9Q2TJJ8 266 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ndst1Q3UHN9 882 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Upf3bQ3ULL6 472 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Krt15Q61414 452 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Anp32cQ64G17 123 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Q6GQV0 436 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Snx19Q6P4T1 997 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Olfr389Q7TRX7 312 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Metap1Q8BP48 386 aaKnown RBP9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Kank2Q8BX02 843 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Castor2Q8CAB8 329 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Agbl3Q8CDP0 1006 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Unc45bQ8CGY6 931 aaKnown RBP9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dnajc28Q8VCE1 385 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rnf138rt1Q9D9M9 248 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gtf2h1Q9DBA9 547 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Trhr2Q9ERT2 382 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Vstm4T1NXB5 319 aa9.51□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Col4a6B1AVK5 1691 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tp53bp1P70399 1969 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Malrd1A2AJX4 2123 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Hnrnph3D3Z3N4 346 aaKnown RBP9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm11236J3QMS7 360 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tnfrsf18O35714 228 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ass1P16460 412 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Prdx5P99029 210 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gbp1Q01514 589 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Vps51Q3UVL4 782 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 L1td1Q587J6 782 aaKnown RBP9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Mysm1Q69Z66 819 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Lrig3Q6P1C6 1117 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Arhgap10Q6Y5D8 786 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tas2r134Q7TQB0 298 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Znf473Q8BI67 892 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Csnk1g3Q8C4X2 424 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Smoc2Q8CD91 447 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tcp11l2Q8K1H7 517 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tmem132aQ922P8 1018 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 CenpqQ9CPQ5 267 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ndufaf7Q9CWG8 436 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ttc9bQ9D6E4 239 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Znf354bQ9QXT9 601 aa9.5□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tmem240B2RWJ3 173 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Acp4D3YTS9 425 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zfp408H7BX78 710 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 ByslO54825 436 aaKnown RBP9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Myo1aO88329 1043 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tnnc1P19123 161 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gpr15Q0VDU3 360 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 PomkQ3TUA9 349 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 CochQ62507 552 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Fmnl3Q6ZPF4 1028 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Kcnf1Q7TSH7 493 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Epn1Q80VP1 575 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Arhgap11aQ80Y19 987 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Elmo3Q8BYZ7 720 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pak2Q8CIN4 524 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 LgsnQ8CIX8 563 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Nol7Q9D7Z3 254 aaKnown RBP9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Spatc1lQ9D9W0 342 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dock1Q8BUR4 1865 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Plin4O88492 1403 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 PcntP48725 2898 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Osbpl7A2A716 963 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dpy19l4A2AJQ3 722 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 ZxdbA2CE44 873 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 AU015836B2RUM3 263 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm3002E9PW72 216 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm4302E9PX25 294 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Olfr552E9Q545 317 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Adam19O35674 920 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 AlbP07724 608 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Chmp6P0C0A3 200 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Serpinh1P19324 417 aaKnown RBP9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Shmt1P50431 478 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Smcr8Q3UMB5 935 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Wbp1lQ8BGW2 348 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Slc7a14Q8BXR1 771 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rbm34Q8C5L7 375 aaKnown RBP9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Slc26a6Q8CIW6 758 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gdap2Q9DBL2 498 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 MesdQ9ERE7 224 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Trim44Q9QXA7 346 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Acox2Q9QXD1 681 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Kcnd2Q9Z0V2 630 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gfpt2Q9Z2Z9 682 aa9.49□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zfp236S4R299 1847 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Slc23a4A0A0J9YUX7 615 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Veph1A1A535 833 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Abcb5B5X0E4 1255 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gdf6P43028 454 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Actn4P57780 912 aaKnown RBP9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 B3gat3P58158 335 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 YwhaeP62259 255 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms