RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Raph1F2Z3U3 1266 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 GclmO09172 274 aaKnown RBP13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Soat2O88908 525 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 TdgP56581 421 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Antxr2Q6DFX2 487 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ric8bQ80XE1 520 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Fam53cQ8BXQ8 393 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Pla2g12bQ99P27 195 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Trim16Q99PP9 556 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Snx2Q9CWK8 519 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Abcb11Q9QY30 1321 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Apol8A2VDH7 339 aaKnown RBP13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Morc3F7BJB9 942 aaKnown RBP13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Zfp850J3QPC5 689 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Usp35M0QWN7 1009 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Lrrc23O35125 340 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Vps4bP46467 444 aaKnown RBP13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ptgs2Q05769 604 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Zfp956Q3UZY6 572 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Prkaa1Q5EG47 559 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Chi3l1Q61362 389 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Lrig3Q6P1C6 1117 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Rhpn2Q8BWR8 686 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 UvragQ8K245 698 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Nrbf2Q8VCQ3 287 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ubxn2aQ99KJ0 258 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ccdc70Q9D9B0 223 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Pola2P33611 600 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Creb3Q61817 404 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Trpa1Q8BLA8 1125 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 AopepQ8BXQ6 817 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 OplahQ8K010 1288 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Apobec2Q9WV35 224 aa13.13□□□□□ -0.31
Sdf4-201ENSMUST00000050078 SynrgQ5SV85 1306 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Fgf15O35622 218 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Dync1i2O88487 612 aaKnown RBP13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Magea1O89006 320 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Magea5O89009 320 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 ZfaP23607 742 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Sash1P59808 1230 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Stx3Q64704 289 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Trim17Q7TPM3 477 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Efl1Q8C0D5 1127 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ttc22Q8C159 568 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Cwf19l1Q8CI33 537 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Gprc5cQ8K3J9 440 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ap3m2Q8R2R9 418 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Vps39Q8R5L3 886 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 SmtnQ921U8 923 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Fuca2Q99KR8 461 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Magea2Q9R2A2 320 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Zfyve9A2A8R0 1397 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Olfr1354E9Q5G9 310 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Foxm1O08696 760 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Apba3O88888 571 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Rad54lP70270 747 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Trim43cP86449 446 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 SpoplQ2M2N2 392 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Itih3Q61704 889 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Kcns3Q8BQZ8 491 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Uba3Q8C878 462 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 TwnkQ8CIW5 685 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Pcdha5Q91Y15 934 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Gstt4Q9D4P7 240 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Hic1Q9R1Y5 733 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 PtproE9Q612 1226 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Bnip3O55003 187 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 MycP01108 439 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Myl2P51667 166 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Foxp2P58463 714 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Nol4P60954 483 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Atp13a3Q5XF89 1219 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Khdrbs1Q60749 443 aaKnown RBP13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Kcnk18Q6VV64 394 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ldlrap1Q8C142 308 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Sox30Q8CGW4 782 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Tesk2Q8VCT9 570 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Tex9Q9D845 387 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 PygmQ9WUB3 842 aaKnown RBP13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Nccrp1G3X9C2 266 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Alkbh1P0CB42 389 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 NficP70255 439 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Asprv1Q09PK2 339 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 D630036H23RikQ3UQD6 204 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Cwf19l2Q8BG79 887 aaKnown RBP13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Pde10aQ8CA95 790 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Lrit1Q8K099 624 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Prpf4Q9DAW6 521 aaKnown RBP13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Tlr5Q9JLF7 859 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 ThegQ9JMB1 375 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Capn7Q9R1S8 813 aa13.12□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Ankfn1A0A140LIW7 1083 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Mpp3O88910 568 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Hspa4lP48722 838 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Gprin1Q3UNH4 932 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Bhmt2Q91WS4 363 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Rgs3Q9DC04 966 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Flvcr1B2RXV4 560 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 PdgfraP26618 1089 aa13.11□□□□□ -0.31
Sdf4-201ENSMUST00000050078 Trim75Q3UWZ0 467 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms