RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tktl2Q9D4D4 627 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tnni1Q9WUZ5 187 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm8879F6R3J9 157 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Foxm1O08696 760 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ripk2P58801 539 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cyp3a13Q64464 503 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pramel6Q810Y9 485 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Sgms1Q8VCQ6 419 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ddx39aQ8VDW0 427 aaKnown RBP10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Adi1Q99JT9 179 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Poc5Q9DBS8 558 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mrpl4Q9DCU6 294 aaKnown RBP10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dlc1Q9R0Z9 1092 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 PtsQ9R1Z7 144 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Bpifb9bA2AJD1 591 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Slfn8B1ARD8 910 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rab6bP61294 208 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 RgmbQ7TQ33 436 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Bpifb9aQ80XI7 591 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Q8CIL4 281 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 SfnO70456 248 aaKnown RBP10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tmem117Q8BH18 514 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Q8BP99 230 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dennd2aQ8C4S8 1000 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Trim54Q9ERP3 366 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pdk2Q9JK42 407 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Fam205aA2APU8 1308 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 PdgfaP20033 211 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Hoxa13Q62424 386 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pum3Q8BKS9 647 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Fbxo38Q8BMI0 1194 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pspc1Q8R326 523 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 PycardQ9EPB4 193 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 PlekQ9JHK5 350 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 MaddQ80U28 1577 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 C87977A2A958 498 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Scgb2b19J3QM75 112 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ccna2P51943 422 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Psmc5P62196 406 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Togaram2Q3TYG6 1002 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lgi2Q8K4Z0 550 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Glra3Q91XP5 464 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mss51Q9D5Z5 446 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 E230025N22RikG5E8S3 482 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm3248K7N721 186 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Orc4O88708 433 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pdcd2P46718 343 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pou6f1Q07916 301 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rasip1Q3U0S6 961 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Zbtb8osQ505B7 168 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Vmn1r209Q5NC97 312 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ahcyl2Q68FL4 613 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ttc7aQ8BGB2 858 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 E4f1Q8CCE9 783 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cyp4f17G3UW78 524 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 F830016B08RikG3UWE2 416 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Unc5cO08747 931 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Crabp2P22935 138 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Nedd4P46935 887 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Atp6v1b2P62814 511 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Spdye4aQ5IBH6 268 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tdrd5Q5VCS6 1040 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rbbp8Q80YR6 893 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Svs3bQ8BZH8 265 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pcdha10Q91Y20 946 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cyp4f16Q99N17 524 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lrrc17Q9CXD9 443 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rbck1Q9WUB0 508 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Atp6v1c1Q9Z1G3 382 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Frmd7A2AD83 703 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Stat3P42227 770 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 InaP46660 501 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tcf12Q61286 706 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dsg1aQ61495 1057 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ces1eQ64176 562 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 DcakdQ8BHC4 231 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 AagabQ8R2R3 316 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Hspbp1Q99P31 357 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rnf25Q9QZR0 456 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rnf103Q9R1W3 683 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm17019K7N6W5 255 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Prl2c3P04768 224 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Apoa4P06728 395 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 NficP70255 439 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 NfiaQ02780 532 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pyroxd1Q3TMV7 498 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Senp6Q6P7W0 1132 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gucy2gQ6TL19 1100 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 ItchQ8C863 864 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tspan14Q8QZY6 270 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Psmd9Q9CR00 222 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Edf1Q9JMG1 148 aaKnown RBP10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cpsf3Q9QXK7 684 aa10.62□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm6370A0A0G2JGX9 315 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm11985A0A1B0GS61 206 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm2237E9Q501 211 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm3591K7N6X2 186 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm6309L7N481 315 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pfkfb2P70265 519 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Coq7P97478 217 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms