RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Mrpl4Q9DCU6 294 aaKnown RBP8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Actn2Q9JI91 894 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mta2Q9R190 668 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Phf2Q9WTU0 1096 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Prdm12A2AJ77 365 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Klhdc7aA2APT9 773 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gimd1E9PW74 217 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gm21973F6WEZ7 68 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cbfa2t2O70374 594 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gsta4P24472 222 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mxi1P50540 228 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Stmn1P54227 149 aaKnown RBP8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Grm2Q14BI2 872 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Senp5Q6NXL6 749 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Sun2Q8BJS4 731 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Uba6Q8C7R4 1053 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Il31raQ8K5B1 716 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pomgnt1Q91X88 660 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Prmt7Q922X9 692 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 CalcbQ99MP3 130 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Snx1Q9WV80 522 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mroh7A2AVR2 1279 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 TazI7HJS2 263 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Wee1P47810 646 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 SpoplQ2M2N2 392 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rmdn3Q3UJU9 470 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Recql4Q75NR7 1216 aaKnown RBP8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Anapc5Q8BTZ4 740 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 AopepQ8BXQ6 817 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Vps37bQ8R0J7 285 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Zkscan3Q91VW9 553 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cep72Q9D3R3 646 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tmed2Q9R0Q3 201 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Nup188Q6ZQH8 1759 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Gm5795E9PZN8 263 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Guca2bO09051 106 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Prl6a1O35257 230 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 DffaO54786 331 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 S100bP50114 92 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Znf354cQ571J5 560 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 E2f5Q61502 335 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PnocQ64387 187 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Kif11Q6P9P6 1052 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tarsl2Q8BLY2 790 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Znf76Q8BMU0 568 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Slc51aQ8R000 340 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Vmn1r64Q8R2B8 320 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Xpo6Q924Z6 1125 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mrps5Q99N87 432 aaKnown RBP8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cntn6Q9JMB8 1028 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Vmn2r87E9PZX4 848 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Art2aP17981 287 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Eps15P42567 897 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Arl1P61211 181 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Zdhhc15Q8BGJ0 337 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ints6lQ8BND4 861 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Lrrc8cQ8R502 803 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Taf12Q8VE65 161 aa8.97□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Casq2O09161 415 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Apba3O88888 571 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Grm1P97772 1199 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Fam160b1Q8CDM8 764 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PpatQ8CIH9 517 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ints9Q8K114 658 aaKnown RBP8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Lgi2Q8K4Z0 550 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Trpm8Q8R4D5 1104 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Eps8l2Q99K30 729 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rabl3Q9D4V7 236 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Caln1Q9JJG7 219 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cep85lA0A1W2P884 806 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cd70O55237 195 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mov10P23249 1004 aaKnown RBP8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 PdgfraP26618 1089 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Nr2c2P49117 596 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 MafP54843 370 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Eef1dP57776 281 aaKnown RBP8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 EnahQ03173 802 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cyfip2Q5SQX6 1253 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 LbpQ61805 481 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Znf507Q6ZPY5 941 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Moxd2Q7TT41 619 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Epc2Q8C0I4 808 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Arhgap24Q8C4V1 747 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Bzw1Q9CQC6 419 aaKnown RBP8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Bcs1lQ9CZP5 418 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 1700013H16RikQ9DAC5 291 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Tmod3Q9JHJ0 352 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cyp39a1Q9JKJ9 470 aa8.96□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Zfp850J3QPC5 689 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ap1g2O88512 791 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Msx3P70354 204 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 RelaQ04207 549 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Gga2Q6P5E6 603 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Sh3tc2Q80VA5 1289 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Il17cQ8K4C5 194 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ears2Q9CXJ1 523 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Smok2bQ9QYZ3 484 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Smok2aQ9QYZ6 504 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Gm7086A0A1W2P766 342 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Tnfrsf11aO35305 625 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms