RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C PRR2Q12310 699 aa3.34□□□□□ -1.87
VPS71YML041C YBL112CQ3E7Y4 105 aa3.34□□□□□ -1.87
VPS71YML041C YOR020W-AQ3E824 90 aa3.34□□□□□ -1.87
VPS71YML041C SWI1P09547 1314 aa3.34□□□□□ -1.87
VPS71YML041C SEC22P22214 214 aa3.33□□□□□ -1.88
VPS71YML041C OAC1P32332 324 aa3.33□□□□□ -1.88
VPS71YML041C COS8P38723 381 aa3.33□□□□□ -1.88
VPS71YML041C SRP14P38985 146 aa3.33□□□□□ -1.88
VPS71YML041C RSM25P40496 264 aa3.33□□□□□ -1.88
VPS71YML041C YFR045WP43617 309 aa3.33□□□□□ -1.88
VPS71YML041C SSU72P53538 206 aaPredicted RBP3.33□□□□□ -1.88
VPS71YML041C YOL019WQ08157 551 aa3.33□□□□□ -1.88
VPS71YML041C MSA1Q08471 629 aa3.33□□□□□ -1.88
VPS71YML041C YPL247CQ12523 523 aa3.33□□□□□ -1.88
VPS71YML041C YPL229WQ99395 206 aa3.33□□□□□ -1.88
VPS71YML041C PAN1P32521 1480 aa3.33□□□□□ -1.88
VPS71YML041C ADH3P07246 375 aaKnown RBP3.32□□□□□ -1.88
VPS71YML041C ZWF1P11412 505 aaKnown RBP3.32□□□□□ -1.88
VPS71YML041C FES1P38260 290 aa3.32□□□□□ -1.88
VPS71YML041C MTW1P39731 289 aa3.32□□□□□ -1.88
VPS71YML041C COG3P40094 801 aa3.32□□□□□ -1.88
VPS71YML041C GTR2P53290 341 aa3.32□□□□□ -1.88
VPS71YML041C ECM11Q04110 302 aa3.32□□□□□ -1.88
VPS71YML041C AGC1Q12482 902 aa3.32□□□□□ -1.88
VPS71YML041C YDL085C-AQ3E7B7 68 aaKnown RBP3.32□□□□□ -1.88
VPS71YML041C RPL25P04456 142 aaKnown RBP3.31□□□□□ -1.88
VPS71YML041C SEC4P07560 215 aaKnown RBP3.31□□□□□ -1.88
VPS71YML041C ERG24P32462 438 aaKnown RBP3.31□□□□□ -1.88
VPS71YML041C DOG2P38773 246 aa3.31□□□□□ -1.88
VPS71YML041C DOG1P38774 246 aa3.31□□□□□ -1.88
VPS71YML041C YIP3P53633 176 aa3.31□□□□□ -1.88
VPS71YML041C ALG9P53868 555 aaKnown RBP3.31□□□□□ -1.88
VPS71YML041C LSM7P53905 115 aaKnown RBP3.31□□□□□ -1.88
VPS71YML041C YLR179CQ06252 201 aaKnown RBP3.31□□□□□ -1.88
VPS71YML041C YLR036CQ07986 203 aa3.31□□□□□ -1.88
VPS71YML041C RPF1P38805 295 aaKnown RBP3.3□□□□□ -1.88
VPS71YML041C RMD6P39975 231 aa3.3□□□□□ -1.88
VPS71YML041C PDS1P40316 373 aaPredicted RBP3.3□□□□□ -1.88
VPS71YML041C FLC3P53121 802 aa3.3□□□□□ -1.88
VPS71YML041C NRK1P53915 240 aa3.3□□□□□ -1.88
VPS71YML041C GRH1Q04410 372 aaKnown RBP3.3□□□□□ -1.88
VPS71YML041C YLR030WQ07967 263 aa3.3□□□□□ -1.88
VPS71YML041C QCR2P07257 368 aa3.29□□□□□ -1.88
VPS71YML041C FCY2P17064 533 aa3.29□□□□□ -1.88
VPS71YML041C MAG1P22134 296 aaKnown RBP3.29□□□□□ -1.88
VPS71YML041C MGT1P26188 188 aa3.29□□□□□ -1.88
VPS71YML041C RCN1P36054 211 aa3.29□□□□□ -1.88
VPS71YML041C FIS1P40515 155 aa3.29□□□□□ -1.88
VPS71YML041C BUD13P46947 266 aaPredicted RBP3.29□□□□□ -1.88
VPS71YML041C MIG2P53035 382 aa3.29□□□□□ -1.88
VPS71YML041C MDM34P53083 459 aa3.29□□□□□ -1.88
VPS71YML041C YLR460CP54007 376 aa3.29□□□□□ -1.88
VPS71YML041C SNO1Q03144 224 aa3.29□□□□□ -1.88
VPS71YML041C NOC4Q06512 552 aaPredicted RBP3.29□□□□□ -1.88
VPS71YML041C NOT5Q12514 560 aaPredicted RBP3.29□□□□□ -1.88
VPS71YML041C CCH1P50077 2039 aa3.29□□□□□ -1.88
VPS71YML041C MRS1P07266 363 aa3.28□□□□□ -1.88
VPS71YML041C GCY1P14065 312 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88 RIP-Chip
VPS71YML041C TOM40P23644 387 aaKnown RBP3.28□□□□□ -1.88
VPS71YML041C TCA17P32613 152 aa3.28□□□□□ -1.88
VPS71YML041C YAR068WP39564 161 aa3.28□□□□□ -1.88
VPS71YML041C YIR035CP40579 254 aa3.28□□□□□ -1.88
VPS71YML041C ECO1P43605 281 aa3.28□□□□□ -1.88
VPS71YML041C YNL140CP53910 189 aa3.28□□□□□ -1.88
VPS71YML041C GRE1Q08969 168 aa3.28□□□□□ -1.88
VPS71YML041C YPR063CQ12160 140 aa3.28□□□□□ -1.88
VPS71YML041C USB1Q12208 290 aaKnown RBP3.28□□□□□ -1.88
VPS71YML041C BBP1Q12365 385 aa3.28□□□□□ -1.88
VPS71YML041C GEP5Q12393 293 aa3.28□□□□□ -1.88
VPS71YML041C PUT1P09368 476 aa3.27□□□□□ -1.89
VPS71YML041C DSF1P0CX08 502 aa3.27□□□□□ -1.89
VPS71YML041C YNR073CP0CX09 502 aa3.27□□□□□ -1.89
VPS71YML041C TAH1P25638 111 aaPredicted RBP3.27□□□□□ -1.89
VPS71YML041C TKL2P33315 681 aa3.27□□□□□ -1.89
VPS71YML041C MSA2P36157 363 aa3.27□□□□□ -1.89
VPS71YML041C YBR063CP38083 404 aa3.27□□□□□ -1.89
VPS71YML041C YGP1P38616 354 aaKnown RBP3.27□□□□□ -1.89
VPS71YML041C HMF1P40037 129 aaKnown RBP3.27□□□□□ -1.89
VPS71YML041C OST2P46964 130 aa3.27□□□□□ -1.89
VPS71YML041C AIM25P47140 327 aa3.27□□□□□ -1.89
VPS71YML041C FCF1Q05498 189 aaPredicted RBP3.27□□□□□ -1.89
VPS71YML041C YOL024WQ08172 172 aa3.27□□□□□ -1.89
VPS71YML041C NIP7Q08962 181 aaKnown RBP3.27□□□□□ -1.89
VPS71YML041C YDL012CQ12489 107 aa3.27□□□□□ -1.89
VPS71YML041C IGO2Q9P305 131 aa3.27□□□□□ -1.89
VPS71YML041C CDC7P06243 507 aa3.26□□□□□ -1.89
VPS71YML041C SGA1P08019 549 aa3.26□□□□□ -1.89
VPS71YML041C SNF4P12904 322 aa3.26□□□□□ -1.89
VPS71YML041C SKG1P36169 355 aa3.26□□□□□ -1.89
VPS71YML041C AST2P39945 430 aaKnown RBP3.26□□□□□ -1.89
VPS71YML041C RPA43P46669 326 aa3.26□□□□□ -1.89
VPS71YML041C COG5P53951 403 aa3.26□□□□□ -1.89
VPS71YML041C YNL010WP53981 241 aaKnown RBP3.26□□□□□ -1.89
VPS71YML041C LPP1Q04396 274 aa3.26□□□□□ -1.89
VPS71YML041C GRX8Q05926 109 aa3.26□□□□□ -1.89
VPS71YML041C YHR139C-AO13536 103 aa3.25□□□□□ -1.89
VPS71YML041C ATG22P25568 528 aa3.25□□□□□ -1.89
VPS71YML041C PTM1P32857 523 aa3.25□□□□□ -1.89
VPS71YML041C ARC15P40518 154 aaRIP-Chip data3.25□□□□□ -1.89not detected
VPS71YML041C TMA22P47089 198 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms