RNA–Protein interactions for RNA: YDL107W

MSS2, Transcript of Peripherally bound inner membrane protein of the mitochondrial matrix, yeast

Gene MSS2, Length 1,056 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS2	YDL107W	MRPS17	Q03246	237 aa	Predicted RBP	2.82	□□□□□ -1.96
MSS2	YDL107W	YMD8	Q03697	442 aa		2.82	□□□□□ -1.96
MSS2	YDL107W	HRT1	Q08273	121 aa		2.82	□□□□□ -1.96
MSS2	YDL107W	NIP7	Q08962	181 aa	Known RBP	2.82	□□□□□ -1.96
MSS2	YDL107W	FKS1	P38631	1876 aa	Known RBP	2.82	□□□□□ -1.96
MSS2	YDL107W	HTB1	P02293	131 aa	Known RBP	2.81	□□□□□ -1.96
MSS2	YDL107W	HTB2	P02294	131 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	YHR032W-A	P0C5N6	59 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	TAF14	P35189	244 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	YPT52	P36018	234 aa	Known RBP	2.81	□□□□□ -1.96
MSS2	YDL107W	RPF1	P38805	295 aa	Known RBP	2.81	□□□□□ -1.96
MSS2	YDL107W	YAR068W	P39564	161 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	COG3	P40094	801 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	IRC18	P47056	224 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	ABF2	Q02486	183 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	ATG39	Q06159	398 aa		2.81	□□□□□ -1.96
MSS2	YDL107W	Q0255	P03881	472 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	OAC1	P32332	324 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	VMA11	P32842	164 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	YBR063C	P38083	404 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	IKI1	P38874	309 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	YMR279C	Q03263	540 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	MIX17	Q03667	156 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	YDR248C	Q03786	193 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	SUE1	Q06524	206 aa		2.8	□□□□□ -1.96
MSS2	YDL107W	LSO2	Q3E772	92 aa	Known RBP	2.8	□□□□□ -1.96
MSS2	YDL107W	DSK2	P48510	373 aa		2.79	□□□□□ -1.96
MSS2	YDL107W	CAB4	P53332	305 aa		2.79	□□□□□ -1.96
MSS2	YDL107W	PDR17	P53844	350 aa		2.79	□□□□□ -1.96
MSS2	YDL107W	GIM3	P53900	129 aa		2.79	□□□□□ -1.96
MSS2	YDL107W	RPL26A	P05743	127 aa	Known RBP	2.78	□□□□□ -1.96
MSS2	YDL107W	GCN3	P14741	305 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	CCA1	P21269	546 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	RFA3	P26755	122 aa	Known RBP	2.78	□□□□□ -1.96
MSS2	YDL107W	DOG2	P38773	246 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	DOG1	P38774	246 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	MED6	P38782	295 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	FAR7	P43592	221 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	RPA43	P46669	326 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	YJR146W	P47174	117 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	YGR026W	P53217	278 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	RPL26B	P53221	127 aa	Known RBP	2.78	□□□□□ -1.96
MSS2	YDL107W	SLM2	P53955	656 aa		2.78	□□□□□ -1.96
MSS2	YDL107W	TUS1	Q06412	1307 aa		2.77	□□□□□ -1.97
MSS2	YDL107W	JIP3	O13555	125 aa		2.77	□□□□□ -1.97
MSS2	YDL107W	RPL27A	P0C2H6	136 aa	Known RBP	2.77	□□□□□ -1.97
MSS2	YDL107W	RPL27B	P0C2H7	136 aa	Known RBP	2.77	□□□□□ -1.97
MSS2	YDL107W	YPR170W-B	P0C5R9	85 aa		2.77	□□□□□ -1.97
MSS2	YDL107W	MGM101	P32787	269 aa	Known RBP	2.77	□□□□□ -1.97
MSS2	YDL107W	ECM33	P38248	429 aa	Known RBP	2.77	□□□□□ -1.97
MSS2	YDL107W	YHL026C	P38740	315 aa		2.77	□□□□□ -1.97
MSS2	YDL107W	YJR056C	P47115	236 aa		2.77	□□□□□ -1.97
MSS2	YDL107W	SPS18	P32572	300 aa		2.76	□□□□□ -1.97
MSS2	YDL107W	UTR5	P32630	166 aa		2.76	□□□□□ -1.97
MSS2	YDL107W	APS1	P35181	156 aa		2.76	□□□□□ -1.97
MSS2	YDL107W	BMT5	P40493	336 aa		2.76	□□□□□ -1.97
MSS2	YDL107W	GET1	P53192	235 aa		2.76	□□□□□ -1.97
MSS2	YDL107W	TLG1	Q03322	224 aa		2.76	□□□□□ -1.97
MSS2	YDL107W	MHT1	Q12525	324 aa		2.76	□□□□□ -1.97
MSS2	YDL107W	YPK2	P18961	677 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	SCM4	P32564	187 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	YCR087C-A	P37263	153 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	SNX4	P47057	423 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	PRM8	P53174	237 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	DIA1	P54005	336 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	DID2	P69771	204 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	CDD1	Q06549	142 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	ABP140	Q08641	628 aa	Known RBP	2.75	□□□□□ -1.97
MSS2	YDL107W	AKR2	Q12013	749 aa		2.75	□□□□□ -1.97
MSS2	YDL107W	RAD9	P14737	1309 aa		2.74	□□□□□ -1.97
MSS2	YDL107W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
MSS2	YDL107W	IRC22	P40006	225 aa		2.74	□□□□□ -1.97
MSS2	YDL107W	MRPL49	P40858	161 aa	Predicted RBP	2.74	□□□□□ -1.97
MSS2	YDL107W	SMD3	P43321	101 aa	Known RBP	2.74	□□□□□ -1.97
MSS2	YDL107W	NOP19	P53317	196 aa	Predicted RBP	2.74	□□□□□ -1.97
MSS2	YDL107W	LPP1	Q04396	274 aa		2.74	□□□□□ -1.97
MSS2	YDL107W	ATG38	Q05789	226 aa	Known RBP	2.74	□□□□□ -1.97
MSS2	YDL107W	TDA8	Q6B2U8	126 aa		2.74	□□□□□ -1.97
MSS2	YDL107W	YCL012C	Q8J0M4	134 aa		2.74	□□□□□ -1.97
MSS2	YDL107W	RPL9A	P05738	191 aa	Known RBP	2.73	□□□□□ -1.97
MSS2	YDL107W	ATG22	P25568	528 aa		2.73	□□□□□ -1.97
MSS2	YDL107W	CLB6	P32943	380 aa		2.73	□□□□□ -1.97
MSS2	YDL107W	TRM5	P38793	499 aa		2.73	□□□□□ -1.97
MSS2	YDL107W	YIL001W	P40560	513 aa		2.73	□□□□□ -1.97
MSS2	YDL107W	RPL9B	P51401	191 aa	Known RBP	2.73	□□□□□ -1.97
MSS2	YDL107W	COS6	P53344	381 aa		2.73	□□□□□ -1.97
MSS2	YDL107W	VPS68	Q12016	184 aa		2.73	□□□□□ -1.97
MSS2	YDL107W	CTR2	P38865	189 aa		2.72	□□□□□ -1.97
MSS2	YDL107W	RMD6	P39975	231 aa		2.72	□□□□□ -1.97
MSS2	YDL107W	YNL010W	P53981	241 aa	Known RBP	2.72	□□□□□ -1.97
MSS2	YDL107W	GAS3	Q03655	524 aa		2.72	□□□□□ -1.97
MSS2	YDL107W	QCR7	P00128	127 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	CDC8	P00572	216 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	MER1	P16523	270 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	APA2	P22108	325 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	SCO1	P23833	295 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	RSM25	P40496	264 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	PET191	Q02772	108 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	MDM32	Q12171	622 aa		2.71	□□□□□ -1.98
MSS2	YDL107W	YHR214C-E	Q8TGK0	99 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 139.5 ms