RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SHC2P98077 582 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 GAS6Q14393 721 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 EMC2Q15006 297 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 AMHR2Q16671 573 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 SLC44A4Q53GD3 710 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 PPM1JQ5JR12 505 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 TWF2Q6IBS0 349 aaKnown RBP8.16□□□□□ -1.1
PHGDH-225ENST00000641720 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-225ENST00000641720 ITFG1Q8TB96 612 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 NLRP7Q8WX94 980 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 NACC1Q96RE7 527 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 HINFPQ9BQA5 517 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 PLA2G2FQ9BZM2 168 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 CCSER1Q9C0I3 900 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 BHMT2Q9H2M3 363 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 RNF39Q9H2S5 420 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 PLEKHA4Q9H4M7 779 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 DHX33Q9H6R0 707 aaKnown RBP8.16□□□□□ -1.1
PHGDH-225ENST00000641720 RSAD1Q9HA92 442 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 NRBP2Q9NSY0 501 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 ANKEF1Q9NU02 776 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 STK39Q9UEW8 545 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 CNTNAP2Q9UHC6 1331 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 CDV3Q9UKY7 258 aaKnown RBP8.16□□□□□ -1.1
PHGDH-225ENST00000641720 WASF3Q9UPY6 502 aa8.16□□□□□ -1.1
PHGDH-225ENST00000641720 ZFP37Q9Y6Q3 630 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-225ENST00000641720 ACACAQ13085 2346 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 MYO18AQ92614 2054 aaKnown RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 PTPRBP23467 1997 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 ARHGEF35A5YM69 484 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 ADAM12O43184 909 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 LAMTOR5O43504 91 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 SLC26A4O43511 780 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 TBC1D4O60343 1298 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 GDF9O60383 454 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 GADD45BO75293 160 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 POMCP01189 267 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 PFKFB1P16118 471 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 RPL17P18621 184 aaKnown RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 MUTP22033 750 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 SFPQP23246 707 aaKnown RBP eCLIP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 TMOD1P28289 359 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 HOXA9P31269 272 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 RFC5P40937 340 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 CSTF1Q05048 431 aaKnown RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 MTAPQ13126 283 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 COL9A2Q14055 689 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 BMS1Q14692 1282 aaKnown RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 NAB2Q15742 525 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 E2F4Q16254 413 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 RTP2Q5QGT7 225 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 PADI6Q6TGC4 694 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 NPAS3Q8IXF0 933 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 PDILTQ8N807 584 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 RASSF8Q8NHQ8 419 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 RAD54LQ92698 747 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 FGF13Q92913 245 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 TMEM143Q96AN5 459 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 CALML4Q96GE6 196 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 CCDC43Q96MW1 224 aaKnown RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 PAAF1Q9BRP4 392 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 EIF2AQ9BY44 585 aaKnown RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 PANK2Q9BZ23 570 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 GCOM2Q9BZD3 368 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 GPRC5CQ9NQ84 441 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 SPATA6Q9NWH7 488 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 CACNG4Q9UBN1 327 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 CDH7Q9ULB5 785 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 HPSEQ9Y251 543 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 FAN1Q9Y2M0 1017 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 PRG3Q9Y2Y8 225 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-225ENST00000641720 STK24Q9Y6E0 443 aa8.15□□□□□ -1.1
PHGDH-225ENST00000641720 CFAP46Q8IYW2 2715 aa8.15□□□□□ -1.11
PHGDH-225ENST00000641720 APC2O95996 2303 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 KALRNO60229 2985 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 ZMYM2Q9UBW7 1377 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 NPHP3-ACAD11A0A0J9YXS1 232 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 FAM237AA0A1B0GTK4 181 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 A0A1B0GVL5 298 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 A0A1W2PQ27 194 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 A0A1W2PQ64 194 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 A0A1W2PQD8 194 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 ARL5CA6NH57 179 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 FAM170BA6NMN3 283 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 STK25O00506 426 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 LRP3O75074 770 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 ALDH2P05091 517 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 PLA2G4BP0C869 781 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 SKIP12755 728 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 FSHRP23945 695 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 IGFBP6P24592 240 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-225ENST00000641720 TXLNAP40222 546 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 STAT6P42226 847 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 NDUFA8P51970 172 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 SLC12A3P55017 1021 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 DMWDQ09019 674 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 SPEM2Q0P670 501 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms